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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111215087   DEAD-box ATP-dependent RNA helicase 21-like 
 ath-u.5   AT2G33730   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100799264   DEAD-box ATP-dependent RNA helicase 21 
 gma-u.5   100792810   DEAD-box ATP-dependent RNA helicase 21 
 vvi-u.5   100263263   DEAD-box ATP-dependent RNA helicase 21 
 vvi-u.5   100241918   DEAD-box ATP-dependent RNA helicase 21 
 ppo-u.5   7474827   DEAD-box ATP-dependent RNA helicase 21 
 ppo-u.5   7493486   DEAD-box ATP-dependent RNA helicase 21 
 mtr-u.5   25494333   DEAD-box ATP-dependent RNA helicase 21 
 sly-u.5   101267079   DEAD-box ATP-dependent RNA helicase 21 
 sly-u.5   101245423   DEAD-box ATP-dependent RNA helicase 21-like 
 osa-u.5   4333866   DEAD-box ATP-dependent RNA helicase 21-like 
 zma-u.5   100286176   ATP-dependent RNA helicase DDX23 
 zma-u.5   100281521   uncharacterized LOC100281521 

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Top 50 coexpressed genes to 111215087 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111215087 (bna-r.1 coexpression data)

CoexMap"111215087"


bnaLOC111215087 | Entrez gene ID : 111215087    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 2 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (186 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_022574002.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  E.R. 1,  pero 1  (predict for XP_022574002.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_022574002.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111215087

.
ath-u.5
for
AT2G33730

.
gma-u.5
for
100799264

.
gma-u.5
for
100792810

.
vvi-u.5
for
100263263

.
vvi-u.5
for
100241918

.
ppo-u.5
for
7474827

.
ppo-u.5
for
7493486

.
mtr-u.5
for
25494333

.
sly-u.5
for
101267079

.
sly-u.5
for
101245423

.
osa-u.5
for
4333866

.
zma-u.5
for
100286176

.
zma-u.5
for
100281521

.


Ortholog ID: 4527
Species ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi nta nta
Symbol AT2G33730 LOC100799264 LOC100792810 LOC101267079 LOC101245423 LOC4333866 LOC100281521 LOC100286176 LOC103857505 LOC103865293 LOC100263263 LOC100241918 LOC7493486 LOC7474827 LOC25494333 LOC123087129 LOC123095842 LOC123447418 LOC107903793 LOC107934847 LOC106423074 LOC106447192 CHLRE_13g592150v5 LOC8062925 LOC8068309 LOC102588025 LOC102584823 LOC102628771 LOC100828951 LOC142161720 LOC107769656
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21-like DEAD-box ATP-dependent RNA helicase 21-like uncharacterized LOC100281521 ATP-dependent RNA helicase DDX23 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21-like DEAD-box ATP-dependent RNA helicase 21 uncharacterized protein DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21-like DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21 DEAD-box ATP-dependent RNA helicase 21-like DEAD-box ATP-dependent RNA helicase 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 4
sly03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03430 Mismatch repair 3
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 10
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04144 Endocytosis 2
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi03018 RNA degradation 3
sbi03040 Spliceosome 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
sbi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 9
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817938 100799264 100792810 101267079 101245423 4333866 100281521 100286176 103857505 103865293 100263263 100241918 7493486 7474827 25494333 123087129 123095842 123447418 107903793 107934847 106423074 106447192 5718660 8062925 8068309 102588025 102584823 102628771 100828951 142161720 107769656
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