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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111215162   uncharacterized LOC111215162 
 bna-r.1   111200716   polyadenylate-binding protein 1-like 

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Top 50 coexpressed genes to 111215162 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111215162 (bna-r.1 coexpression data)

CoexMap"111215162"


bnaLOC111215162 | Entrez gene ID : 111215162    
Species bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03015 [list] [network] mRNA surveillance pathway (420 genes)
bna03018 [list] [network] RNA degradation (380 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0005685 [list] [network] U1 snRNP  (102 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (106 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (154 genes)  IEA  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (47 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_048601422.1 [sequence] [blastp]
XP_048601423.1 [sequence] [blastp]
XP_048601424.1 [sequence] [blastp]
XP_048601425.1 [sequence] [blastp]
XP_048601426.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  cysk 1,  E.R._vacu 1  (predict for XP_048601422.1)
cyto 8,  chlo 1,  cysk 1,  E.R._vacu 1  (predict for XP_048601423.1)
cyto 8,  chlo 1,  cysk 1,  E.R._vacu 1  (predict for XP_048601424.1)
cyto 6,  chlo 1,  nucl 1,  plas 1,  pero 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_048601425.1)
cyto 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_048601426.1)
Subcellular
localization
TargetP
other 8,  scret 4  (predict for XP_048601422.1)
other 8,  scret 4  (predict for XP_048601423.1)
other 8,  scret 4  (predict for XP_048601424.1)
other 9  (predict for XP_048601425.1)
mito 6  (predict for XP_048601426.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111215162
bna-r.1
for
111200716


Ortholog ID: 23486
Species bna bna
Symbol LOC111215162 LOC111200716
Function* uncharacterized LOC111215162 polyadenylate-binding protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 111215162 111200716
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