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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111215504   protein PALE CRESS, chloroplastic 
 bna-r.1   111205846   protein PALE CRESS, chloroplastic 
 bna-r.1   125586403   protein PALE CRESS, chloroplastic 
 bna-r.1   106434849   protein PALE CRESS, chloroplastic 
 bra-r.6   103866326   protein PALE CRESS, chloroplastic 
 ath-u.5   PAC   pale cress protein (PAC) 
 ghi-r.1   121220269   protein PALE CRESS, chloroplastic 
 ghi-r.1   107949213   protein PALE CRESS, chloroplastic 
 cit-r.1   102626893   protein PALE CRESS, chloroplastic 
 gma-u.5   100802895   protein PALE CRESS, chloroplastic 
 vvi-u.5   100249345   protein PALE CRESS, chloroplastic 
 ppo-u.5   7466274   protein PALE CRESS, chloroplastic 
 mtr-u.5   11424433   protein PALE CRESS, chloroplastic 
 sly-u.5   101250047   protein PALE CRESS, chloroplastic 
 sot-r.1   102581895   protein PALE CRESS, chloroplastic 
 nta-r.1   107797160   protein PALE CRESS, chloroplastic-like 
 nta-r.1   107775741   protein PALE CRESS, chloroplastic 
 osa-u.5   4338694   protein PALE CRESS, chloroplastic 
 zma-u.5   100283570   PAC 
 tae-r.2   123054653   protein PALE CRESS, chloroplastic 
 tae-r.2   123131594   protein PALE CRESS, chloroplastic 
 tae-r.2   123181906   protein PALE CRESS, chloroplastic 
 hvu-r.1   123442203   protein PALE CRESS, chloroplastic 
 sbi-r.1   8076862   protein PALE CRESS, chloroplastic 
 bdi-r.1   100831844   protein PALE CRESS, chloroplastic 

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Top 50 coexpressed genes to 111215504 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111215504 (bna-r.1 coexpression data)

CoexMap"111215504"


bnaLOC111215504 | Entrez gene ID : 111215504    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009965 [list] [network] leaf morphogenesis  (6 genes)  IEA  
GO:0010239 [list] [network] chloroplast mRNA processing  (6 genes)  IEA  
GO:0071482 [list] [network] cellular response to light stimulus  (49 genes)  IEA  
GO:0048366 [list] [network] leaf development  (51 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (193 genes)  IEA  
GO CC
GO:0009501 [list] [network] amyloplast  (6 genes)  IEA  
GO:0009509 [list] [network] chromoplast  (6 genes)  IEA  
GO:0009513 [list] [network] etioplast  (6 genes)  IEA  
GO:0009537 [list] [network] proplastid  (6 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
Protein XP_022574689.2 [sequence] [blastp]
XP_048637003.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 1,  extr 1  (predict for XP_022574689.2)
chlo 4,  cyto 4,  mito 1,  extr 1  (predict for XP_048637003.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_022574689.2)
chlo 9  (predict for XP_048637003.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111215504
bna-r.1
for
111205846
bna-r.1
for
125586403
bna-r.1
for
106434849
bra-r.6
for
103866326
ath-u.5
for
PAC
ghi-r.1
for
121220269
ghi-r.1
for
107949213
cit-r.1
for
102626893
gma-u.5
for
100802895
vvi-u.5
for
100249345
ppo-u.5
for
7466274
mtr-u.5
for
11424433
sly-u.5
for
101250047
sot-r.1
for
102581895
nta-r.1
for
107797160
nta-r.1
for
107775741
osa-u.5
for
4338694
zma-u.5
for
100283570
tae-r.2
for
123054653
tae-r.2
for
123131594
tae-r.2
for
123181906
hvu-r.1
for
123442203
sbi-r.1
for
8076862
bdi-r.1
for
100831844


Ortholog ID: 8435
Species bna bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC111215504 LOC106434849 LOC106434841 LOC103866326 PAC LOC121220269 LOC107949213 LOC102626893 LOC100802895 LOC100249345 LOC7466274 LOC11424433 LOC101250047 LOC102581895 LOC107797160 LOC107775741 LOC4338694 LOC100283570 LOC123054653 LOC123131594 LOC123181906 LOC123442203 LOC8076862 LOC100831844
Function* protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic-like protein PALE CRESS, chloroplastic pale cress protein (PAC) protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic-like protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic PAC protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic protein PALE CRESS, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111215504 106434849 106434841 103866326 819424 121220269 107949213 102626893 100802895 100249345 7466274 11424433 101250047 102581895 107797160 107775741 4338694 100283570 123054653 123131594 123181906 123442203 8076862 100831844
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