ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	112326006	heavy metal-associated isoprenylated plant protein 41-like
ppo-r.4	112326006	heavy metal-associated isoprenylated plant protein 41-like
ppo-u.5	7491897	heavy metal-associated isoprenylated plant protein 41
gma-u.5	100810848	uncharacterized protein At4g26485
mtr-u.5	11415662	uncharacterized protein At4g26485
vvi-u.5	109121381	heavy metal-associated isoprenylated plant protein 41-like
vvi-u.5	104877812	uncharacterized protein At4g26485
sly-u.5	101268886	25S rRNA (uridine(2634)-N(3))-methyltransferase
osa-u.5	4347379	heavy metal-associated isoprenylated plant protein 41
zma-u.5	100277735	uncharacterized LOC100277735

functional annotation

KEGG

GO BP

GO:0070475 [list] [network] rRNA base methylation

(22 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(6111 genes)

IEA

GO MF

GO:0070042 [list] [network] rRNA (uridine-N3-)-methyltransferase activity

(9 genes)

IEA

Protein

XP_024448974.1 [sequence] [blastp]
XP_024448975.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 1, pero 1, cyto_pero 1	(predict for XP_024448974.1)
nucl 4, cyto 3, pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_024448975.1)

Subcellular
localization
TargetP

other 9	(predict for XP_024448974.1)
other 9	(predict for XP_024448975.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 112326006	ppo-r.4 for 112326006	ppo-u.5 for 7491897	gma-u.5 for 100810848	mtr-u.5 for 11415662	vvi-u.5 for 109121381	vvi-u.5 for 104877812	sly-u.5 for 101268886	osa-u.5 for 4347379	zma-u.5 for 100277735

Ortholog ID: 836

Species

ppo

gma

vvi

ghi

cit

sly

sot

nta

osa

hvu

sbi

bdi

Symbol

Function^*

heavy metal-associated isoprenylated plant protein 41

heavy metal-associated isoprenylated plant protein 41-like

uncharacterized protein At4g26485

uncharacterized LOC107917062

uncharacterized LOC107917093

uncharacterized protein At4g26485-like

25S rRNA (uridine(2634)-N(3))-methyltransferase

uncharacterized LOC102600672

uncharacterized protein At4g26485

heavy metal-associated isoprenylated plant protein 41

heavy metal-associated isoprenylated plant protein 41-like

heavy metal-associated isoprenylated plant protein 41

uncharacterized LOC8055833

uncharacterized LOC100822578

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03020	RNA polymerase	3
vvi03420	Nucleotide excision repair	3
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03020	RNA polymerase	2
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

7491897

112326006

100810848

100244779

107917062

107917093

102623488

101268886

102600672

107784212

4347379

123399190

8055831

8055833

100822578

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 112326006 (ppo-u.5 coexpression data)

Top 50 enrichment test to 112326006 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	ath	nta	tae	cre	sot
Paralog	3	1	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 112326006 (ppo-u.5 coexpression data)

Top 50 enrichment test to 112326006 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**