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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   112497882   F-box/LRR-repeat protein 4-like 
 ghi-r.1   107906959   F-box/LRR-repeat protein 20 
 ghi-r.1   121229238   probable transcriptional regulatory protein At2g25830 
 ppo-u.5   7462300   F-box/LRR-repeat protein 4 
 sly-u.5   104648919   F-box protein At3g58530-like 
 sot-r.1   102593530   F-box/LRR-repeat protein 4-like 
 nta-r.1   107812794   uncharacterized LOC107812794 
 nta-r.1   107821948   F-box/LRR-repeat protein 4-like 
 cre-r.1   CHLRE_12g524900v5   uncharacterized protein 

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Top 50 coexpressed genes to 112497882 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112497882 (cit-r.1 coexpression data)

CoexMap"112497882"


citLOC112497882 | Entrez gene ID : 112497882    
Species cit ghi ppo sly sot nta cre vvi bdi osa tae bna zma mtr sbi gma bra ath hvu
Paralog 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (49 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (45 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_024952955.1 [sequence] [blastp]
XP_024952956.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  pero 1,  golg 1  (predict for XP_024952955.1)
cyto 5,  nucl 4,  pero 1,  golg 1  (predict for XP_024952956.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_024952955.1)
other 7,  chlo 4  (predict for XP_024952956.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
112497882
ghi-r.1
for
107906959
ghi-r.1
for
121229238
ppo-u.5
for
7462300
sly-u.5
for
104648919
sot-r.1
for
102593530
nta-r.1
for
107812794
nta-r.1
for
107821948
cre-r.1
for
CHLRE_12g524900v5


Ortholog ID: 16463
Species cit ghi ghi ppo sly sot nta nta cre
Symbol LOC112497882 LOC107906959 LOC121229238 LOC7462300 LOC104648919 LOC102593530 LOC107812794 LOC107821948 CHLRE_12g524900v5
Function* F-box/LRR-repeat protein 4-like F-box/LRR-repeat protein 20 probable transcriptional regulatory protein At2g25830 F-box/LRR-repeat protein 4 F-box protein At3g58530-like F-box/LRR-repeat protein 4-like uncharacterized LOC107812794 F-box/LRR-repeat protein 4-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112497882 107906959 121229238 7462300 104648919 102593530 107812794 107821948 5722511
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