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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   112940011   uncharacterized LOC112940011 
 sly-r.6   112940011   uncharacterized LOC112940011 
 sly-u.5   101249102   uncharacterized LOC101249102 
 sot-r.1   102600051   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 nta-r.1   107793776   uncharacterized LOC107793776 
 nta-r.1   107800400   uncharacterized LOC107800400 
 nta-r.1   107806491   uncharacterized LOC107806491 
 ath-u.5   AT3G22290   Endoplasmic reticulum vesicle transporter protein 
 gma-u.5   100788499   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 gma-u.5   100785098   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 bra-r.6   103859950   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 bra-r.6   103869094   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 vvi-u.5   100260862   uncharacterized LOC100260862 
 ppo-u.5   7453738   uncharacterized LOC7453738 
 ppo-u.5   7479616   uncharacterized LOC7479616 
 mtr-u.5   25489643   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ghi-r.1   107959737   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ghi-r.1   107924691   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 ghi-r.1   107959634   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 bna-r.1   125600350   endoplasmic reticulum-Golgi intermediate compartment protein 3-like 
 bna-r.1   125602341   endoplasmic reticulum-Golgi intermediate compartment protein 3-like 
 bna-r.1   106352814   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 cit-r.1   102627957   uncharacterized LOC102627957 
 osa-u.5   4334335   uncharacterized LOC4334335 
 zma-u.5   103629888   probable endoplasmic reticulum-Golgi intermediate compartment protein 3 
 zma-u.5   100192107   DUF1692 domain, endoplasmic reticulum vescicle transporter protein 
 zma-u.5   100278902   uncharacterized LOC100278902 
 tae-r.2   123113565   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 tae-r.2   123123094   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 tae-r.2   123105296   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 hvu-r.1   123452557   probable endoplasmic reticulum-Golgi intermediate compartment protein 3 
 sbi-r.1   8085400   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 bdi-r.1   100822580   endoplasmic reticulum-Golgi intermediate compartment protein 3 
 cre-r.1   CHLRE_08g358579v5   uncharacterized protein 

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Top 50 coexpressed genes to 112940011 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112940011 (sly-u.5 coexpression data)

CoexMap"112940011"


slyLOC112940011 | Entrez gene ID : 112940011    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 3 1 2 2 1 2 1 3 3 1 1 3 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030134 [list] [network] COPII-coated ER to Golgi transport vesicle  (53 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (509 genes)  IEA  
GO MF
Protein XP_069148466.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  chlo_mito 2,  cyto 1,  mito 1,  cyto_nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_069148466.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_069148466.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
112940011
sly-r.6
for
112940011
sly-u.5
for
101249102
sot-r.1
for
102600051
nta-r.1
for
107793776
nta-r.1
for
107800400
nta-r.1
for
107806491
ath-u.5
for
AT3G22290
gma-u.5
for
100788499
gma-u.5
for
100785098
bra-r.6
for
103859950
bra-r.6
for
103869094
vvi-u.5
for
100260862
ppo-u.5
for
7453738
ppo-u.5
for
7479616
mtr-u.5
for
25489643
ghi-r.1
for
107959737
ghi-r.1
for
107924691
ghi-r.1
for
107959634
bna-r.1
for
125600350
bna-r.1
for
125602341
bna-r.1
for
106352814
cit-r.1
for
102627957
osa-u.5
for
4334335
zma-u.5
for
103629888
zma-u.5
for
100192107
zma-u.5
for
100278902
tae-r.2
for
123113565
tae-r.2
for
123123094
tae-r.2
for
123105296
hvu-r.1
for
123452557
sbi-r.1
for
8085400
bdi-r.1
for
100822580
cre-r.1
for
CHLRE_08g358579v5


Ortholog ID: 5117
Species sly sly sot nta nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna cit osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC112940011 LOC101249102 LOC102600051 LOC107793776 LOC107800400 LOC107806491 AT3G22290 LOC100788499 LOC100785098 LOC103859950 LOC103869094 LOC100260862 LOC7453738 LOC7479616 LOC25489643 LOC107959737 LOC107959634 LOC107911719 LOC125600350 LOC125602341 LOC106352814 LOC102627957 LOC4334335 LOC103629888 LOC100192107 LOC100278902 LOC123113565 LOC123123094 LOC123105296 LOC123452557 LOC8085400 LOC100822580 CHLRE_08g358579v5
Function* uncharacterized LOC112940011 uncharacterized LOC101249102 endoplasmic reticulum-Golgi intermediate compartment protein 3 uncharacterized LOC107793776 uncharacterized LOC107800400 uncharacterized LOC107806491 Endoplasmic reticulum vesicle transporter protein endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 uncharacterized LOC100260862 uncharacterized LOC7453738 uncharacterized LOC7479616 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3-like endoplasmic reticulum-Golgi intermediate compartment protein 3-like endoplasmic reticulum-Golgi intermediate compartment protein 3 uncharacterized LOC102627957 uncharacterized LOC4334335 probable endoplasmic reticulum-Golgi intermediate compartment protein 3 DUF1692 domain, endoplasmic reticulum vescicle transporter protein uncharacterized LOC100278902 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 probable endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 endoplasmic reticulum-Golgi intermediate compartment protein 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly04145 Phagosome 3
sly04142 Lysosome 2
sly04144 Endocytosis 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04145 Phagosome 2
sly04148 Efferocytosis 2
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 3
gma04144 Endocytosis 2
gma04517 IgSF CAM signaling 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo00510 N-Glycan biosynthesis 5
ppo00513 Various types of N-glycan biosynthesis 5
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 6
mtr04142 Lysosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03420 Nucleotide excision repair 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 9
osa00510 N-Glycan biosynthesis 8
osa00513 Various types of N-glycan biosynthesis 8
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00513 Various types of N-glycan biosynthesis 3
zma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 6
tae00513 Various types of N-glycan biosynthesis 6
tae04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 112940011 101249102 102600051 107793776 107800400 107806491 821798 100788499 100785098 103859950 103869094 100260862 7453738 7479616 25489643 107959737 107959634 107911719 125600350 125602341 106352814 102627957 4334335 103629888 100192107 100278902 123113565 123123094 123105296 123452557 8085400 100822580 5716307
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