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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   112998793   rop guanine nucleotide exchange factor 12 
 gma-r.7   112998793   rop guanine nucleotide exchange factor 12 
 gma-u.5   100781787   rop guanine nucleotide exchange factor 12 
 gma-u.5   100778231   rho guanine nucleotide exchange factor 8 
 gma-u.5   100812078   rop guanine nucleotide exchange factor 12 
 mtr-u.5   11442005   rop guanine nucleotide exchange factor 12 
 mtr-u.5   25491404   rop guanine nucleotide exchange factor 12 
 ath-u.5   ROPGEF11   rop guanine nucleotide exchange factor-like protein 
 vvi-u.5   100260990   rho guanine nucleotide exchange factor 8 
 vvi-u.5   100261758   rho guanine nucleotide exchange factor 8 
 sly-u.5   101248400   rop guanine nucleotide exchange factor 12 
 sly-u.5   101251652   rop guanine nucleotide exchange factor 9 
 osa-u.5   4325510   rop guanine nucleotide exchange factor 9 
 osa-u.5   4325619   rop guanine nucleotide exchange factor 11 
 osa-u.5   4328986   rop guanine nucleotide exchange factor 10 
 zma-u.5   100274290   uncharacterized LOC100274290 
 zma-u.5   100216854   uncharacterized LOC100216854 
 zma-u.5   100191433   uncharacterized LOC100191433 

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Top 50 coexpressed genes to 112998793 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112998793 (gma-u.5 coexpression data)

CoexMap"112998793"


gmaLOC112998793 | Entrez gene ID : 112998793    
Species gma mtr ath vvi sly osa zma bdi hvu bra cit bna ppo sbi ghi sot nta cre tae
Paralog 5 2 1 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (76 genes)  IEA  
Protein XP_025981001.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 4  (predict for XP_025981001.1)
Subcellular
localization
TargetP
other 7  (predict for XP_025981001.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
112998793
gma-r.7
for
112998793
gma-u.5
for
100781787
gma-u.5
for
100778231
gma-u.5
for
100812078
mtr-u.5
for
11442005
mtr-u.5
for
25491404
ath-u.5
for
ROPGEF11
vvi-u.5
for
100260990
vvi-u.5
for
100261758
sly-u.5
for
101248400
sly-u.5
for
101251652
osa-u.5
for
4325510
osa-u.5
for
4325619
osa-u.5
for
4328986
zma-u.5
for
100274290
zma-u.5
for
100216854
zma-u.5
for
100191433


Ortholog ID: 905
Species gma gma mtr ath vvi vvi ghi ghi cit sly sot sot nta nta osa osa zma zma tae bdi
Symbol LOC100777496 LOC100812078 LOC11442005 ROPGEF12 LOC100260990 LOC100261758 LOC107952141 LOC107949595 LOC102616233 LOC101251652 LOC102600973 LOC102584199 LOC107820833 LOC107778855 LOC4328986 LOC4325510 LOC100216854 LOC103651184 LOC123065602 LOC100829485
Function* rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 RHO guanyl-nucleotide exchange factor 12 rho guanine nucleotide exchange factor 8 rho guanine nucleotide exchange factor 8 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 12 rop guanine nucleotide exchange factor 12-like rop guanine nucleotide exchange factor 12-like rho guanine nucleotide exchange factor 8-like rop guanine nucleotide exchange factor 10 rop guanine nucleotide exchange factor 9 uncharacterized LOC100216854 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9 rop guanine nucleotide exchange factor 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 8
sot00941 Flavonoid biosynthesis 4
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 4
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777496 100812078 11442005 844325 100260990 100261758 107952141 107949595 102616233 101251652 102600973 102584199 107820833 107778855 4328986 4325510 100216854 103651184 123065602 100829485
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