ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11406165	heat stress transcription factor A-4c
mtr-r.5	11406165	heat stress transcription factor A-4c
mtr-m.5	11406165	heat stress transcription factor A-4c
gma-u.5	HSF-29	heat stress transcription factor 29
gma-u.5	HSF-13	heat stress transcription factor 13
gma-u.5	HSF-11	heat stress transcription factor 11
ppo-u.5	7476313	heat stress transcription factor A-4c
ppo-u.5	7463811	heat stress transcription factor A-4c
ppo-u.5	7466291	heat stress transcription factor A-4b
ath-u.5	HSF A4A	heat shock transcription factor A4A
ath-u.5	RHA1	winged-helix DNA-binding transcription factor family protein
bra-r.6	103834087	heat stress transcription factor A-4a
bra-r.6	103839646	heat stress transcription factor A-4c
bra-r.6	103856909	heat stress transcription factor A-4a
vvi-u.5	100258413	heat stress transcription factor A-4a
vvi-u.5	100250580	heat stress transcription factor A-4b
ghi-r.1	107960242	heat stress transcription factor A-4a-like
ghi-r.1	107925314	heat stress transcription factor A-4a-like
ghi-r.1	107941816	heat stress transcription factor A-4a
bna-r.1	125602406	heat stress transcription factor A-4a-like
bna-r.1	111197727	heat stress transcription factor A-4a
bna-r.1	125594723	heat stress transcription factor A-4a-like
cit-r.1	102631439	heat stress transcription factor A-4b-like
cit-r.1	102622798	heat stress transcription factor A-4a
sly-u.5	101259859	heat stress transcription factor A-4c
sly-u.5	101249882	heat stress transcription factor A-4c
sly-u.5	101247401	heat stress transcription factor A-4a
sot-r.1	102590106	heat stress transcription factor A-4c-like
sot-r.1	102582897	heat stress transcription factor A-4a-like
sot-r.1	102593932	heat stress transcription factor A-4a
nta-r.1	107773626	heat stress transcription factor A-4c-like
nta-r.1	107779435	heat stress transcription factor A-4c
nta-r.1	107812985	heat stress transcription factor A-4c
osa-u.5	4325556	heat stress transcription factor A-4b-like
osa-u.5	4339409	heat stress transcription factor A-4d-like
zma-u.5	103630625	heat stress transcription factor A-4d
zma-u.5	103636652	heat stress transcription factor A-4b-like
tae-r.2	123070778	heat stress transcription factor A-4b
tae-r.2	123064252	heat stress transcription factor A-4d
tae-r.2	123079167	heat stress transcription factor A-4b
hvu-r.1	123417736	heat stress transcription factor A-4d-like
hvu-r.1	123444407	heat stress transcription factor A-4b-like
sbi-r.1	8084440	heat stress transcription factor A-4d
sbi-r.1	8072075	heat stress transcription factor A-4b
bdi-r.1	100840214	heat stress transcription factor A-4d-like
bdi-r.1	100836030	heat stress transcription factor A-4b

Top 50 coexpressed genes to 11406165 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11406165 (mtr-u.5 coexpression data)

CoexMap"11406165"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034605 [list] [network] cellular response to heat	(37 genes)	IEA
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II	(425 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2707 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(185 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1100 genes)	IEA

Protein

XP_003629847.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_003629847.1)

Subcellular
localization
TargetP

other 8, chlo 3

(predict for XP_003629847.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11406165	mtr-r.5 for 11406165	mtr-m.5 for 11406165	gma-u.5 for HSF-29	gma-u.5 for HSF-13	gma-u.5 for HSF-11	ppo-u.5 for 7476313	ppo-u.5 for 7463811	ppo-u.5 for 7466291	ath-u.5 for HSF A4A	ath-u.5 for RHA1	bra-r.6 for 103834087	bra-r.6 for 103839646	bra-r.6 for 103856909	vvi-u.5 for 100258413	vvi-u.5 for 100250580	ghi-r.1 for 107960242	ghi-r.1 for 107925314	ghi-r.1 for 107941816	bna-r.1 for 125602406	bna-r.1 for 111197727	bna-r.1 for 125594723	cit-r.1 for 102631439	cit-r.1 for 102622798	sly-u.5 for 101259859	sly-u.5 for 101249882	sly-u.5 for 101247401	sot-r.1 for 102590106	sot-r.1 for 102582897	sot-r.1 for 102593932	nta-r.1 for 107773626	nta-r.1 for 107779435	nta-r.1 for 107812985	osa-u.5 for 4325556	osa-u.5 for 4339409	zma-u.5 for 103630625	zma-u.5 for 103636652	tae-r.2 for 123070778	tae-r.2 for 123064252	tae-r.2 for 123079167	hvu-r.1 for 123417736	hvu-r.1 for 123444407	sbi-r.1 for 8084440	sbi-r.1 for 8072075	bdi-r.1 for 100840214	bdi-r.1 for 100836030

Ortholog

Ortholog ID: 2422

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC11406165

HSF-29

HSF-11

HSF-31

LOC7476313

LOC7463811

LOC7466291

HSF A4A

RHA1

Function^*