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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11414619   protein LTV1 homolog 
 mtr-r.5   11414619   protein LTV1 homolog 
 mtr-m.5   11414619   protein LTV1 homolog 
 gma-u.5   100805612   protein LTV1 homolog 
 gma-u.5   100793853   protein LTV1 homolog 
 ppo-u.5   7493941   uncharacterized LOC7493941 
 ppo-u.5   7490674   uncharacterized LOC7490674 
 ath-u.5   AT3G49990   Low temperature viability protein 
 bra-r.6   103860640   protein LTV1 homolog 
 vvi-u.5   100247237   uncharacterized LOC100247237 
 ghi-r.1   107955437   protein LTV1 homolog 
 ghi-r.1   107958649   protein LTV1 homolog 
 bna-r.1   106439997   protein LTV1 homolog 
 bna-r.1   106410775   protein LTV1 homolog 
 cit-r.1   102613808   uncharacterized LOC102613808 
 cit-r.1   107174506   uncharacterized LOC107174506 
 sly-u.5   101251881   uncharacterized LOC101251881 
 sot-r.1   102583152   protein LTV1 homolog 
 nta-r.1   107810650   uncharacterized LOC107810650 
 osa-u.5   4344017   uncharacterized LOC4344017 
 osa-u.5   4332942   uncharacterized LOC4332942 
 zma-u.5   109942216   protein LTV1 homolog 
 tae-r.2   123044081   uncharacterized LOC123044081 
 tae-r.2   123104109   protein LTV1 homolog 
 tae-r.2   123112334   protein LTV1 homolog 
 hvu-r.1   123399217   protein LTV1 homolog 
 hvu-r.1   123425149   acidic leucine-rich nuclear phosphoprotein 32-related protein 1-like 
 sbi-r.1   8082596   protein LTV1 homolog 
 sbi-r.1   8079378   uncharacterized LOC8079378 
 bdi-r.1   100844812   protein LTV1 homolog 
 bdi-r.1   100828059   uncharacterized LOC100828059 
 cre-r.1   CHLRE_02g146000v5   uncharacterized protein 

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Top 50 coexpressed genes to 11414619 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11414619 (mtr-u.5 coexpression data)

CoexMap"11414619"


mtrLOC11414619 | Entrez gene ID : 11414619      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 1 1 1 2 2 2 1 1 1 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000056 [list] [network] ribosomal small subunit export from nucleus  (5 genes)  IEA  
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (79 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (12 genes)  IEA  
GO:0005829 [list] [network] cytosol  (784 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
Protein XP_003605016.1 [sequence] [blastp]
XP_039689205.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_003605016.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_039689205.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003605016.1)
other 8  (predict for XP_039689205.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11414619
mtr-r.5
for
11414619
mtr-m.5
for
11414619
gma-u.5
for
100805612
gma-u.5
for
100793853
ppo-u.5
for
7493941
ppo-u.5
for
7490674
ath-u.5
for
AT3G49990
bra-r.6
for
103860640
vvi-u.5
for
100247237
ghi-r.1
for
107955437
ghi-r.1
for
107958649
bna-r.1
for
106439997
bna-r.1
for
106410775
cit-r.1
for
102613808
cit-r.1
for
107174506
sly-u.5
for
101251881
sot-r.1
for
102583152
nta-r.1
for
107810650
osa-u.5
for
4344017
osa-u.5
for
4332942
zma-u.5
for
109942216
tae-r.2
for
123044081
tae-r.2
for
123104109
tae-r.2
for
123112334
hvu-r.1
for
123399217
hvu-r.1
for
123425149
sbi-r.1
for
8082596
sbi-r.1
for
8079378
bdi-r.1
for
100844812
bdi-r.1
for
100828059
cre-r.1
for
CHLRE_02g146000v5


Ortholog ID: 5325
Species mtr gma gma ppo ppo ath bra vvi ghi ghi bna bna cit cit sly sot nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC11414619 LOC100805612 LOC100793853 LOC7493941 LOC7490674 AT3G49990 LOC103860640 LOC100247237 LOC107955437 LOC107958649 LOC106439997 LOC106410775 LOC102613808 LOC107174506 LOC101251881 LOC102583152 LOC107810650 LOC4344017 LOC4332942 LOC103635543 LOC100275484 LOC123104109 LOC123112334 LOC123187833 LOC123399217 LOC123425149 LOC8082596 LOC8079378 LOC100844812 LOC100828059 CHLRE_02g146000v5
Function* protein LTV1 homolog protein LTV1 homolog protein LTV1 homolog uncharacterized LOC7493941 uncharacterized LOC7490674 Low temperature viability protein protein LTV1 homolog uncharacterized LOC100247237 protein LTV1 homolog protein LTV1 homolog protein LTV1 homolog protein LTV1 homolog uncharacterized LOC102613808 uncharacterized LOC107174506 uncharacterized LOC101251881 protein LTV1 homolog uncharacterized LOC107810650 uncharacterized LOC4344017 uncharacterized LOC4332942 protein LTV1 homolog uncharacterized LOC100275484 protein LTV1 homolog protein LTV1 homolog uncharacterized LOC123187833 protein LTV1 homolog acidic leucine-rich nuclear phosphoprotein 32-related protein 1-like protein LTV1 homolog uncharacterized LOC8079378 protein LTV1 homolog uncharacterized LOC100828059 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00750 Vitamin B6 metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00053 Ascorbate and aldarate metabolism 2
zma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae04136 Autophagy - other 3
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11414619 100805612 100793853 7493941 7490674 824161 103860640 100247237 107955437 107958649 106439997 106410775 102613808 107174506 101251881 102583152 107810650 4344017 4332942 103635543 100275484 123104109 123112334 123187833 123399217 123425149 8082596 8079378 100844812 100828059 66052643
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