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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11416644   probable transcription factor At3g04930 
 mtr-r.5   11416644   probable transcription factor At3g04930 
 mtr-u.5   11434643   probable transcription factor At5g28040 
 gma-u.5   100786620   probable transcription factor At3g04930 
 gma-u.5   100779712   probable transcription factor At3g04930 
 gma-u.5   100817182   probable transcription factor At5g28040 
 ppo-u.5   18109054   probable transcription factor At3g04930 
 ath-u.5   AT3G04930   DNA-binding storekeeper protein-related transcriptional regulator 
 ath-u.5   AT5G28040   DNA-binding storekeeper protein-related transcriptional regulator 
 bra-r.6   103874565   probable transcription factor At5g28040 
 bra-r.6   103850023   probable transcription factor At3g04930 
 bra-r.6   103849159   probable transcription factor At3g04930 
 vvi-u.5   100253879   probable transcription factor At3g04930 
 ghi-r.1   107945964   probable transcription factor At3g04930 
 ghi-r.1   107952009   probable transcription factor At3g04930 
 ghi-r.1   107955944   probable transcription factor At3g04930 
 bna-r.1   125593274   probable transcription factor At5g28040 
 bna-r.1   125575917   probable transcription factor At5g28040 
 bna-r.1   106427410   probable transcription factor At3g04930 
 cit-r.1   102610045   probable transcription factor At3g04930 
 sly-u.5   101262473   probable transcription factor At3g04930 
 sly-u.5   101245401   probable transcription factor At5g28040 
 sot-r.1   102593405   mediator-associated protein 1-like 
 sot-r.1   102600805   uncharacterized LOC102600805 
 nta-r.1   107809283   putative transcription factor At3g04930 
 nta-r.1   107776711   putative transcription factor At3g04930 
 nta-r.1   107784943   putative transcription factor At3g04930 
 osa-u.5   9272499   probable transcription factor At3g04930 
 osa-u.5   4344030   probable transcription factor At5g28040 
 zma-u.5   100382800   uncharacterized LOC100382800 
 zma-u.5   100278142   uncharacterized LOC100278142 
 zma-u.5   100273696   uncharacterized LOC100273696 
 tae-r.2   123060887   probable transcription factor At3g04930 
 tae-r.2   123051940   probable transcription factor At5g28040 
 tae-r.2   123044064   probable transcription factor At5g28040 
 hvu-r.1   123429638   probable transcription factor At5g28040 
 hvu-r.1   123443360   probable transcription factor At3g04930 
 hvu-r.1   123398021   probable transcription factor At3g04930 
 sbi-r.1   8072399   probable transcription factor At3g04930 
 sbi-r.1   8063531   probable transcription factor At3g04930 
 sbi-r.1   8057259   probable transcription factor At3g04930 
 bdi-r.1   100841096   probable transcription factor At3g04930 
 bdi-r.1   100825486   probable transcription factor At5g28040 
 bdi-r.1   100822943   probable transcription factor At5g28040 

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Top 50 coexpressed genes to 11416644 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11416644 (mtr-u.5 coexpression data)

CoexMap""


mtrLOC11416644 | Entrez gene ID : 11416644      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 1 2 3 1 3 3 1 2 2 3 2 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function probable transcription factor At3g04930
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
Protein XP_003591032.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  pero 1,  mito 1,  extr 1,  cyto_pero 1  (predict for XP_003591032.2)
Subcellular
localization
TargetP
other 8  (predict for XP_003591032.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11416644
mtr-r.5
for
11416644
mtr-u.5
for
11434643
gma-u.5
for
100786620
gma-u.5
for
100779712
gma-u.5
for
100817182
ppo-u.5
for
18109054
ath-u.5
for
AT3G04930
ath-u.5
for
AT5G28040
bra-r.6
for
103874565
bra-r.6
for
103850023
bra-r.6
for
103849159
vvi-u.5
for
100253879
ghi-r.1
for
107945964
ghi-r.1
for
107952009
ghi-r.1
for
107955944
bna-r.1
for
125593274
bna-r.1
for
125575917
bna-r.1
for
106427410
cit-r.1
for
102610045
sly-u.5
for
101262473
sly-u.5
for
101245401
sot-r.1
for
102593405
sot-r.1
for
102600805
nta-r.1
for
107809283
nta-r.1
for
107776711
nta-r.1
for
107784943
osa-u.5
for
9272499
osa-u.5
for
4344030
zma-u.5
for
100382800
zma-u.5
for
100278142
zma-u.5
for
100273696
tae-r.2
for
123060887
tae-r.2
for
123051940
tae-r.2
for
123044064
hvu-r.1
for
123429638
hvu-r.1
for
123443360
hvu-r.1
for
123398021
sbi-r.1
for
8072399
sbi-r.1
for
8063531
sbi-r.1
for
8057259
bdi-r.1
for
100841096
bdi-r.1
for
100825486
bdi-r.1
for
100822943

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Ortholog ID: 2273
Species mtr mtr gma gma ppo ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC11416644 LOC11434643 LOC100817182 LOC100790030 LOC18109054 AT3G04930 AT5G28040 LOC103874565 LOC103850023 LOC103849159 LOC100253879 LOC107952009 LOC107955944 LOC107919301 LOC106427410 LOC106453076 LOC106449180 LOC102610045 LOC101262473 LOC101245401 LOC102593405 LOC102600805 LOC107809283 LOC107776711 LOC107824825 LOC9272499 LOC4344030 LOC100382800 LOC100278142 LOC100273696 LOC123085831 LOC123069520 LOC123097413 LOC123429638 LOC123398021 LOC123448605 LOC8063531 LOC8057259 LOC8080773 LOC100841096 LOC100825486 LOC100822943
Function* probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At5g28040 probable transcription factor At3g04930 DNA-binding storekeeper protein-related transcriptional regulator DNA-binding storekeeper protein-related transcriptional regulator probable transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At5g28040 mediator-associated protein 1-like uncharacterized LOC102600805 putative transcription factor At3g04930 putative transcription factor At3g04930 putative transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At5g28040 uncharacterized LOC100382800 uncharacterized LOC100278142 uncharacterized LOC100273696 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At3g04930 probable transcription factor At5g28040 probable transcription factor At5g28040
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
hvu00100 Steroid biosynthesis 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00520 Amino sugar and nucleotide sugar metabolism 2
hvu01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi00051 Fructose and mannose metabolism 2
bdi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11416644 11434643 100817182 100790030 18109054 819653 832874 103874565 103850023 103849159 100253879 107952009 107955944 107919301 106427410 106453076 106449180 102610045 101262473 101245401 102593405 102600805 107809283 107776711 107824825 9272499 4344030 100382800 100278142 100273696 123085831 123069520 123097413 123429638 123398021 123448605 8063531 8057259 8080773 100841096 100825486 100822943
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