ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11417243	coatomer subunit gamma
mtr-r.5	11417243	coatomer subunit gamma
mtr-m.5	11417243	coatomer subunit gamma
mtr-u.5	11413931	coatomer subunit gamma
gma-u.5	100789362	coatomer subunit gamma-2
gma-u.5	100784608	coatomer subunit gamma-2
gma-u.5	100814149	coatomer subunit gamma
ppo-u.5	7464033	coatomer subunit gamma
ppo-u.5	7461211	coatomer subunit gamma
ath-u.5	AT4G34450	coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP
vvi-u.5	100853178	coatomer subunit gamma-2
sly-u.5	101263943	coatomer subunit gamma
osa-u.5	4332129	coatomer subunit gamma-1-like
osa-u.5	4342665	coatomer subunit gamma-2-like
zma-u.5	100279780	uncharacterized LOC100279780
zma-u.5	100194138	uncharacterized LOC100194138
zma-u.5	100193726	Coatomer subunit gamma

Annotation

functional annotation

KEGG

GO BP

GO:0009306 [list] [network] protein secretion	(5 genes)	IEA
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport	(27 genes)	IEA
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport	(64 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(234 genes)	IEA

GO CC

GO:0005793 [list] [network] endoplasmic reticulum-Golgi intermediate compartment	(5 genes)	IEA
GO:0030126 [list] [network] COPI vesicle coat	(16 genes)	IEA
GO:0000139 [list] [network] Golgi membrane	(64 genes)	IEA
GO:0005783 [list] [network] endoplasmic reticulum	(487 genes)	IEA

GO MF

GO:0005198 [list] [network] structural molecule activity

(535 genes)

IEA

Protein

XP_003603909.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, nucl 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_003603909.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003603909.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11417243	mtr-r.5 for 11417243	mtr-m.5 for 11417243	mtr-u.5 for 11413931	gma-u.5 for 100789362	gma-u.5 for 100784608	gma-u.5 for 100814149	ppo-u.5 for 7464033	ppo-u.5 for 7461211	ath-u.5 for AT4G34450	vvi-u.5 for 100853178	sly-u.5 for 101263943	osa-u.5 for 4332129	osa-u.5 for 4342665	zma-u.5 for 100279780	zma-u.5 for 100194138	zma-u.5 for 100193726

Ortholog

Ortholog ID: 3723

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

coatomer subunit gamma

coatomer subunit gamma-2

coatomer subunit gamma

coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP

coatomer subunit gamma

coatomer subunit gamma-2

coatomer subunit gamma

coatomer subunit gamma-2

coatomer subunit gamma

coatomer subunit gamma-1-like

coatomer subunit gamma-2-like

uncharacterized LOC100194138

Coatomer subunit gamma

coatomer subunit gamma-2

coatomer subunit gamma-1

coatomer subunit gamma-2

coatomer subunit gamma-1

coatomer subunit gamma-2

coatomer subunit gamma-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3
gma04130	SNARE interactions in vesicular transport	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma03015	mRNA surveillance pathway	2
gma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04142	Lysosome	3
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	4
vvi00190	Oxidative phosphorylation	3
vvi04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	5
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly00510	N-Glycan biosynthesis	2
sly00513	Various types of N-glycan biosynthesis	2
sly01240	Biosynthesis of cofactors	2
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	3
nta00513	Various types of N-glycan biosynthesis	3
nta04141	Protein processing in endoplasmic reticulum	3
nta04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	4
nta00513	Various types of N-glycan biosynthesis	4
nta04141	Protein processing in endoplasmic reticulum	4
nta04142	Lysosome	4
nta00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae04144	Endocytosis	6
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	5
tae04144	Endocytosis	5
tae05100	Bacterial invasion of epithelial cells	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04142	Lysosome	2
hvu05100	Bacterial invasion of epithelial cells	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04142	Lysosome	3
sbi04141	Protein processing in endoplasmic reticulum	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00240	Pyrimidine metabolism	2
sbi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2
bdi03060	Protein export	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	4
bdi04144	Endocytosis	2
bdi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	5
cre04142	Lysosome	2
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

11417243

11413931

100814149

100789362

7461211

7464033

829596

103834411

103837747

100853178

107953429

107919935

106410313

106354772

102608367

101263943

102583052

107820636

107793274

4332129

4342665

100194138

100193726

123046162

123121694

123449228

123431407

8056843

8063680

100839936

100836494

5716794

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11417243 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11417243 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	3	2	1	1	1	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11417243 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11417243 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**