ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11417811	coiled-coil domain-containing protein 130
mtr-r.5	11417811	coiled-coil domain-containing protein 130
mtr-m.5	11417811	coiled-coil domain-containing protein 130
gma-u.5	100804298	coiled-coil domain-containing protein 130
gma-u.5	100781265	coiled-coil domain-containing protein 130
ppo-u.5	7487586	uncharacterized LOC7487586
ppo-u.5	7489372	uncharacterized LOC7489372
ath-u.5	AT1G25682	coiled-coil protein (DUF572)
vvi-u.5	100254193	uncharacterized LOC100254193
sly-u.5	101267402	uncharacterized LOC101267402
osa-u.5	4329178	coiled-coil domain-containing protein 130
zma-u.5	100191242	uncharacterized LOC100191242

functional annotation

KEGG

GO BP

GO:0000398 [list] [network] mRNA splicing, via spliceosome

(155 genes)

IEA

GO CC

GO:0071014 [list] [network] post-mRNA release spliceosomal complex	(18 genes)	IEA
GO:0005684 [list] [network] U2-type spliceosomal complex	(40 genes)	IEA

GO MF

Protein

XP_003591834.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, nucl_plas 4, cyto 1, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_003591834.1)

Subcellular
localization
TargetP

other 7

(predict for XP_003591834.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11417811	mtr-r.5 for 11417811	mtr-m.5 for 11417811	gma-u.5 for 100804298	gma-u.5 for 100781265	ppo-u.5 for 7487586	ppo-u.5 for 7489372	ath-u.5 for AT1G25682	vvi-u.5 for 100254193	sly-u.5 for 101267402	osa-u.5 for 4329178	zma-u.5 for 100191242

Ortholog ID: 7425

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

coiled-coil domain-containing protein 130

uncharacterized LOC7489372

uncharacterized LOC7487586

coiled-coil protein (DUF572)

coiled-coil domain-containing protein 130

uncharacterized LOC100254193

coiled-coil domain-containing protein 130

probable splicing factor YJU2B

uncharacterized LOC102619907

uncharacterized LOC127902132

uncharacterized LOC101267402

coiled-coil domain-containing protein 130-like

uncharacterized LOC107788053

uncharacterized LOC107775368

coiled-coil domain-containing protein 130

uncharacterized LOC100191242

coiled-coil domain-containing protein 130

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04130	SNARE interactions in vesicular transport	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03083	Polycomb repressive complex	4
bna04120	Ubiquitin mediated proteolysis	4
bna04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3
cit04145	Phagosome	2
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	4
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04145	Phagosome	2
nta04148	Efferocytosis	2
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	4
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4

Expression

Expression pattern

Entrez Gene ID^*

11417811

100804298

100781265

7489372

7487586

839146

103835468

103840597

100254193

107934798

107943805

106361858

106347141

102619907

127902132

101267402

102581701

107788053

107775368

4329178

100191242

123180047

123105714

123453166

8074759

100829103

5727321

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11417811 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11417811 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11417811 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11417811 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**