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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11420610   chalcone synthase 2 
 mtr-r.5   11420610   chalcone synthase 2 
 mtr-m.5   11420610   chalcone synthase 2 
 mtr-u.5   11419346   chalcone synthase 5 
 mtr-u.5   25494498   chalcone synthase 9 
 mtr-u.5   11407003   chalcone synthase 4 
 gma-u.5   121175284   chalcone synthase 1 
 gma-u.5   CHS7   chalcone synthase 7 
 gma-u.5   CHS11   chalcone synthase 11 
 ppo-u.5   7493199   chalcone synthase 1 
 ppo-u.5   7493197   chalcone synthase 1 
 ppo-u.5   7460519   chalcone synthase 1 
 ath-u.5   TT4   Chalcone and stilbene synthase family protein 
 bra-r.6   103850907   chalcone synthase 3 
 bra-r.6   103846527   chalcone synthase 1 
 bra-r.6   103836793   chalcone synthase 3 
 vvi-u.5   CHS3   chalcone synthase 
 vvi-u.5   100266849   stilbene synthase 6-like 
 vvi-u.5   100266562   stilbene synthase 2 
 ghi-r.1   107912380   chalcone synthase 2-like 
 ghi-r.1   107914895   chalcone synthase 1-like 
 ghi-r.1   107957085   chalcone synthase 1 
 bna-r.1   111204286   chalcone synthase 3-like 
 bna-r.1   125579034   chalcone synthase 1 
 bna-r.1   106382267   chalcone synthase-like 
 cit-r.1   102606708   chalcone synthase 1 
 cit-r.1   102618836   acridone synthase 2-like 
 cit-r.1   102619137   acridone synthase 2-like 
 sly-u.5   CHS2   chalcone synthase 
 sot-r.1   102580017   chalcone synthase 1B-like 
 nta-r.1   107832236   chalcone synthase G 
 nta-r.1   107801774   chalcone synthase 
 nta-r.1   107809744   chalcone synthase 2 
 osa-u.5   4350636   chalcone synthase 1-like 
 osa-u.5   4342725   chalcone synthase 2 
 zma-u.5   100274415   chalcone synthase 
 zma-u.5   100282642   chalcone synthase 
 tae-r.2   123187050   chalcone synthase 2 
 tae-r.2   123055015   chalcone synthase 2 
 hvu-r.1   123424400   chalcone synthase 2-like 
 hvu-r.1   123443044   chalcone synthase 2-like 
 hvu-r.1   123442962   chalcone synthase 2-like 
 sbi-r.1   8069670   chalcone synthase 1 
 sbi-r.1   8064815   chalcone synthase 2 
 sbi-r.1   8064820   chalcone synthase 6 
 bdi-r.1   100829639   chalcone synthase 2 

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Top 50 coexpressed genes to 11420610 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11420610 (mtr-u.5 coexpression data)

CoexMap"11420610"


mtrLOC11420610 | Entrez gene ID : 11420610    
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 3 1 3 3 3 3 3 1 1 3 2 2 2 3 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00941 [list] [network] Flavonoid biosynthesis (83 genes)
mtr04712 [list] [network] Circadian rhythm - plant (62 genes)
GO BP
GO:0030639 [list] [network] polyketide biosynthetic process  (24 genes)  IEA  
GO CC
GO MF
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (365 genes)  IEA  
Protein XP_003621536.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  mito 1  (predict for XP_003621536.1)
Subcellular
localization
TargetP
other 6  (predict for XP_003621536.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11420610
mtr-r.5
for
11420610
mtr-m.5
for
11420610
mtr-u.5
for
11419346
mtr-u.5
for
25494498
mtr-u.5
for
11407003
gma-u.5
for
121175284
gma-u.5
for
CHS7
gma-u.5
for
CHS11
ppo-u.5
for
7493199
ppo-u.5
for
7493197
ppo-u.5
for
7460519
ath-u.5
for
TT4
bra-r.6
for
103850907
bra-r.6
for
103846527
bra-r.6
for
103836793
vvi-u.5
for
CHS3
vvi-u.5
for
100266849
vvi-u.5
for
100266562
ghi-r.1
for
107912380
ghi-r.1
for
107914895
ghi-r.1
for
107957085
bna-r.1
for
111204286
bna-r.1
for
125579034
bna-r.1
for
106382267
cit-r.1
for
102606708
cit-r.1
for
102618836
cit-r.1
for
102619137
sly-u.5
for
CHS2
sot-r.1
for
102580017
nta-r.1
for
107832236
nta-r.1
for
107801774
nta-r.1
for
107809744
osa-u.5
for
4350636
osa-u.5
for
4342725
zma-u.5
for
100274415
zma-u.5
for
100282642
tae-r.2
for
123187050
tae-r.2
for
123055015
hvu-r.1
for
123424400
hvu-r.1
for
123443044
hvu-r.1
for
123442962
sbi-r.1
for
8069670
sbi-r.1
for
8064815
sbi-r.1
for
8064820
bdi-r.1
for
100829639


Ortholog ID: 258
Species mtr mtr mtr gma gma gma ppo ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sot nta nta nta osa osa zma zma tae tae hvu hvu hvu sbi sbi sbi bdi
Symbol LOC11411483 LOC11428910 LOC25499670 CHS7 CHS4B CHS3B LOC7466313 TT4 LOC103850907 LOC103846527 LOC103836793 LOC100263443 LOC100855299 LOC100246283 LOC107934810 LOC107888463 LOC107888447 LOC125579034 LOC106426632 LOC106367233 LOC102606708 LOC102619137 LOC102612856 CHS2 CHS1 LOC102580017 LOC107832236 LOC107801774 LOC107813425 LOC4350636 LOC4342725 LOC100274415 LOC100282642 LOC123123471 LOC123123470 LOC123442962 LOC123442699 LOC123442440 LOC8069670 LOC8064815 LOC8064814 LOC100829639
Function* chalcone synthase 1A chalcone synthase 5 chalcone synthase 4 chalcone synthase 7 chalcone synthase 4b chalcone synthase 3 chalcone synthase Chalcone and stilbene synthase family protein chalcone synthase 3 chalcone synthase 1 chalcone synthase 3 chalcone synthase stilbene synthase 2 stilbene synthase 5-like chalcone synthase 2 chalcone synthase 2 chalcone synthase chalcone synthase 1 chalcone synthase 3-like chalcone synthase 3 chalcone synthase 1 acridone synthase 2-like chalcone synthase 2-like chalcone synthase chalcone synthase chalcone synthase 1B-like chalcone synthase G chalcone synthase chalcone synthase J chalcone synthase 1-like chalcone synthase 2 chalcone synthase chalcone synthase chalcone synthase 2 chalcone synthase 2 chalcone synthase 2-like chalcone synthase 2-like chalcone synthase 2-like chalcone synthase 1 chalcone synthase 2 chalcone synthase 2 chalcone synthase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 8
mtr04712 Circadian rhythm - plant 7
mtr00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 13
mtr04712 Circadian rhythm - plant 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 13
mtr04712 Circadian rhythm - plant 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00360 Phenylalanine metabolism 2
gma00940 Phenylpropanoid biosynthesis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 12
gma04712 Circadian rhythm - plant 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 11
gma04712 Circadian rhythm - plant 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 11
ppo04712 Circadian rhythm - plant 4
ppo00940 Phenylpropanoid biosynthesis 3
ppo00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 2
ath00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 8
bra00940 Phenylpropanoid biosynthesis 4
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 9
bra00940 Phenylpropanoid biosynthesis 3
bra04712 Circadian rhythm - plant 3
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
vvi04712 Circadian rhythm - plant 3
vvi00940 Phenylpropanoid biosynthesis 3
vvi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 19
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
vvi00940 Phenylpropanoid biosynthesis 2
vvi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 12
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 7
ghi04712 Circadian rhythm - plant 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 7
ghi04712 Circadian rhythm - plant 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit01230 Biosynthesis of amino acids 5
cit00020 Citrate cycle (TCA cycle) 3
cit00480 Glutathione metabolism 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 4
cit00996 Biosynthesis of various alkaloids 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 2
cit00941 Flavonoid biosynthesis 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 7
sot04712 Circadian rhythm - plant 3
sot00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta00904 Diterpenoid biosynthesis 4
nta00941 Flavonoid biosynthesis 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 10
nta04712 Circadian rhythm - plant 4
nta00944 Flavone and flavonol biosynthesis 3
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 3
nta00904 Diterpenoid biosynthesis 3
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00941 Flavonoid biosynthesis 6
osa00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 8
zma04712 Circadian rhythm - plant 2
zma00940 Phenylpropanoid biosynthesis 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
zma00460 Cyanoamino acid metabolism 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 7
hvu04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 5
hvu04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 14
sbi04712 Circadian rhythm - plant 9
sbi00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 14
sbi04712 Circadian rhythm - plant 9
sbi00944 Flavone and flavonol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 5
bdi00944 Flavone and flavonol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11411483 11428910 25499670 100782897 100792581 106794283 7466313 831241 103850907 103846527 103836793 100263443 100855299 100246283 107934810 107888463 107888447 125579034 106426632 106367233 102606708 102619137 102612856 778295 778294 102580017 107832236 107801774 107813425 4350636 4342725 100274415 100282642 123123471 123123470 123442962 123442699 123442440 8069670 8064815 8064814 100829639
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