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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11424152   protein timeless homolog 
 mtr-r.5   11424152   protein timeless homolog 
 mtr-m.5   11424152   protein timeless homolog 
 gma-u.5   100796385   uncharacterized LOC100796385 
 gma-u.5   100785399   uncharacterized LOC100785399 
 ppo-u.5   18105661   uncharacterized LOC18105661 
 ath-u.5   ATIM   timeless family protein 
 vvi-u.5   100246656   uncharacterized LOC100246656 
 sly-u.5   101258729   uncharacterized LOC101258729 
 osa-u.5   4338095   uncharacterized LOC4338095 
 zma-u.5   100273829   uncharacterized LOC100273829 

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Top 50 coexpressed genes to 11424152 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11424152 (mtr-u.5 coexpression data)

CoexMap"11424152"


mtrLOC11424152 | Entrez gene ID : 11424152      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043111 [list] [network] replication fork arrest  (2 genes)  IEA  
GO:0000076 [list] [network] DNA replication checkpoint signaling  (14 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (347 genes)  IEA  
GO CC
GO:0031298 [list] [network] replication fork protection complex  (2 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_003592159.1 [sequence] [blastp]
XP_024642189.1 [sequence] [blastp]
XP_039685847.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_003592159.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_024642189.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_039685847.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003592159.1)
other 8  (predict for XP_024642189.1)
other 8  (predict for XP_039685847.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11424152

.
mtr-r.5
for
11424152

.
mtr-m.5
for
11424152

.
gma-u.5
for
100796385

.
gma-u.5
for
100785399

.
ppo-u.5
for
18105661

.
ath-u.5
for
ATIM

.
vvi-u.5
for
100246656

.
sly-u.5
for
101258729

.
osa-u.5
for
4338095

.
zma-u.5
for
100273829

.


Ortholog ID: 9734
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol ATIM LOC100796385 LOC101258729 LOC4338095 LOC100273829 LOC103844773 LOC100246656 LOC18105661 LOC11424152 LOC123068991 LOC123183192 LOC123450975 LOC107947329 LOC121224374 LOC106430533 LOC106412787 CHLRE_06g284850v5 LOC8064694 LOC102579745 LOC102618757 LOC100823556 LOC107820701 LOC107771366
Function* timeless family protein uncharacterized LOC100796385 uncharacterized LOC101258729 uncharacterized LOC4338095 uncharacterized LOC100273829 protein timeless homolog uncharacterized LOC100246656 uncharacterized LOC18105661 protein timeless homolog protein timeless homolog protein timeless homolog protein timeless homolog protein timeless homolog protein timeless homolog protein timeless homolog protein timeless homolog uncharacterized protein protein timeless homolog protein timeless homolog uncharacterized LOC102618757 protein timeless homolog uncharacterized LOC107820701 uncharacterized LOC107771366
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 12
gma03430 Mismatch repair 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03430 Mismatch repair 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 8
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 3
ghi03460 Fanconi anemia pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03460 Fanconi anemia pathway 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
bna03430 Mismatch repair 3
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03440 Homologous recombination 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03460 Fanconi anemia pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835368 100796385 101258729 4338095 100273829 103844773 100246656 18105661 11424152 123068991 123183192 123450975 107947329 121224374 106430533 106412787 66053782 8064694 102579745 102618757 100823556 107820701 107771366
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