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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11427428   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 mtr-r.5   11427428   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 mtr-m.5   11427428   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 gma-u.5   100807700   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 gma-u.5   100805684   pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like 
 ppo-u.5   7486032   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 ath-u.5   AT1G06710   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100261818   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 ghi-r.1   107940504   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 ghi-r.1   107927500   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 bna-r.1   106397195   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 bna-r.1   106427020   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 cit-r.1   102621199   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 sly-u.5   101267372   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 sot-r.1   102587159   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 nta-r.1   107807052   uncharacterized LOC107807052 
 nta-r.1   107791906   uncharacterized LOC107791906 
 osa-u.5   4336229   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 zma-u.5   103646293   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 tae-r.2   123189599   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 tae-r.2   123053723   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 tae-r.2   123045847   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 hvu-r.1   123427076   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 sbi-r.1   8073695   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 
 bdi-r.1   100833227   pentatricopeptide repeat-containing protein At1g06710, mitochondrial 

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Top 50 coexpressed genes to 11427428 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11427428 (mtr-u.5 coexpression data)

CoexMap"11427428"


mtrLOC11427428 | Entrez gene ID : 11427428      
Species mtr gma ppo ath vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 3 2 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024639024.1 [sequence] [blastp]
XP_024639025.1 [sequence] [blastp]
XP_039690488.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  cyto_mito 3,  chlo 2  (predict for XP_024639024.1)
mito 4,  nucl 3,  cyto_mito 3,  chlo 2  (predict for XP_024639025.1)
mito 4,  nucl 3,  cyto_mito 3,  chlo 2  (predict for XP_039690488.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_024639024.1)
mito 6,  chlo 4  (predict for XP_024639025.1)
mito 6,  chlo 4  (predict for XP_039690488.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11427428
mtr-r.5
for
11427428
mtr-m.5
for
11427428
gma-u.5
for
100807700
gma-u.5
for
100805684
ppo-u.5
for
7486032
ath-u.5
for
AT1G06710
vvi-u.5
for
100261818
ghi-r.1
for
107940504
ghi-r.1
for
107927500
bna-r.1
for
106397195
bna-r.1
for
106427020
cit-r.1
for
102621199
sly-u.5
for
101267372
sot-r.1
for
102587159
nta-r.1
for
107807052
nta-r.1
for
107791906
osa-u.5
for
4336229
zma-u.5
for
103646293
tae-r.2
for
123189599
tae-r.2
for
123053723
tae-r.2
for
123045847
hvu-r.1
for
123427076
sbi-r.1
for
8073695
bdi-r.1
for
100833227


Ortholog ID: 11031
Species mtr gma gma ppo ath vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC11427428 LOC100807700 LOC100805684 LOC7486032 AT1G06710 LOC100261818 LOC107940504 LOC107927500 LOC106397195 LOC106427020 LOC102621199 LOC101267372 LOC102587159 LOC107807052 LOC107791906 LOC4336229 LOC103646293 LOC123189599 LOC123053723 LOC123045847 LOC123427076 LOC8073695 LOC100833227
Function* pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial-like pentatricopeptide repeat-containing protein At1g06710, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial uncharacterized LOC107807052 uncharacterized LOC107791906 pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial pentatricopeptide repeat-containing protein At1g06710, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11427428 100807700 100805684 7486032 837181 100261818 107940504 107927500 106397195 106427020 102621199 101267372 102587159 107807052 107791906 4336229 103646293 123189599 123053723 123045847 123427076 8073695 100833227
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