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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11427839   protein TIFY 6B 
 mtr-r.5   11427839   protein TIFY 6B 
 mtr-m.5   11427839   protein TIFY 6B 
 mtr-u.5   25482514   protein TIFY 6B 
 gma-u.5   100807288   protein TIFY 6B 
 gma-u.5   100807043   protein TIFY 6B 
 gma-u.5   100799314   protein TIFY 6B 
 ppo-u.5   7459759   protein TIFY 6B 
 ppo-u.5   7482907   protein TIFY 6B 
 ppo-u.5   18105565   protein TIFY 6B 
 ath-u.5   JAZ3   jasmonate-zim-domain protein 3 
 ath-u.5   JAZ4   jasmonate-zim-domain protein 4 
 vvi-u.5   100262965   protein TIFY 6B 
 vvi-u.5   100245759   protein TIFY 6B 
 sly-u.5   100191114   jasmonate ZIM-domain protein 3 
 sly-u.5   101263620   protein TIFY 6B-like 
 sly-u.5   101244360   protein TIFY 6B 
 osa-u.5   4345625   protein TIFY 6a-like 
 osa-u.5   4347000   protein TIFY 6b-like 
 zma-u.5   100273108   uncharacterized LOC100273108 
 zma-u.5   103647411   uncharacterized LOC103647411 
 zma-u.5   100285509   uncharacterized LOC100285509 

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Top 50 coexpressed genes to 11427839 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11427839 (mtr-u.5 coexpression data)

CoexMap"11427839"


mtrLOC11427839 | Entrez gene ID : 11427839      
Species mtr gma ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 3 3 2 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr04075 [list] [network] Plant hormone signal transduction (454 genes)
GO BP
GO:2000022 [list] [network] regulation of jasmonic acid mediated signaling pathway  (19 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (22 genes)  IEA  
GO:0031347 [list] [network] regulation of defense response  (28 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
Protein XP_003619851.3 [sequence] [blastp]
XP_039682667.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_003619851.3)
nucl 5,  chlo 2,  cyto 2  (predict for XP_039682667.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_003619851.3)
other 4  (predict for XP_039682667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11427839
mtr-r.5
for
11427839
mtr-m.5
for
11427839
mtr-u.5
for
25482514
gma-u.5
for
100807288
gma-u.5
for
100807043
gma-u.5
for
100799314
ppo-u.5
for
7459759
ppo-u.5
for
7482907
ppo-u.5
for
18105565
ath-u.5
for
JAZ3
ath-u.5
for
JAZ4
vvi-u.5
for
100262965
vvi-u.5
for
100245759
sly-u.5
for
100191114
sly-u.5
for
101263620
sly-u.5
for
101244360
osa-u.5
for
4345625
osa-u.5
for
4347000
zma-u.5
for
100273108
zma-u.5
for
103647411
zma-u.5
for
100285509


Ortholog ID: 3103
Species mtr mtr gma gma ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi
Symbol LOC25482514 LOC11427839 LOC100799314 LOC100787821 LOC7482907 LOC7493480 JAZ4 JAZ3 LOC103869637 LOC103838951 LOC100262965 LOC100245759 LOC107959940 LOC107943080 LOC125608992 LOC106452030 LOC102623985 LOC101263620 LOC100191114 LOC102591323 PPS3 LOC107805959 LOC107765037 LOC4345625 LOC4347000 LOC100285509 LOC103647411 LOC123121476 LOC123103697 LOC123396079 LOC8075393 LOC8055801 LOC100828942 LOC100821948
Function* protein TIFY 6B protein TIFY 6B protein TIFY 6B protein TIFY 6B-like protein TIFY 6B protein TIFY 6B jasmonate-zim-domain protein 4 jasmonate-zim-domain protein 3 protein TIFY 6B protein TIFY 6B protein TIFY 6B protein TIFY 6B protein TIFY 6B ABC transporter G family member STR protein TIFY 6B-like protein TIFY 6B-like protein TIFY 6A-like protein TIFY 6B-like jasmonate ZIM-domain protein 3 protein TIFY 6B-like protein TIFY 6B-like protein TIFY 6B-like protein TIFY 6B-like protein TIFY 6a-like protein TIFY 6b-like uncharacterized LOC100285509 uncharacterized LOC103647411 protein TIFY 6b protein TIFY 6b protein TIFY 6b-like protein TIFY 6a protein TIFY 6b protein TIFY 6b protein TIFY 6a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00053 Ascorbate and aldarate metabolism 3
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00071 Fatty acid degradation 2
gma00410 beta-Alanine metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma00640 Propanoate metabolism 2
gma01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
ath04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00941 Flavonoid biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 5
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04075 Plant hormone signal transduction 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 9
nta00941 Flavonoid biosynthesis 6
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 6
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
osa00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 11
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 11
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00940 Phenylpropanoid biosynthesis 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25482514 11427839 100799314 100787821 7482907 7493480 841271 821055 103869637 103838951 100262965 100245759 107959940 107943080 125608992 106452030 102623985 101263620 100191114 102591323 102589610 107805959 107765037 4345625 4347000 100285509 103647411 123121476 123103697 123396079 8075393 8055801 100828942 100821948
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