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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11428881   transcription factor E2FC 
 mtr-r.5   11428881   transcription factor E2FC 
 mtr-m.5   11428881   transcription factor E2FC 
 gma-u.5   100797301   transcription factor E2FC 
 ath-u.5   ATE2F2   winged-helix DNA-binding transcription factor family protein 
 bra-r.6   103833054   transcription factor E2FC 
 vvi-u.5   100247139   transcription factor E2FC 
 bna-r.1   106429362   transcription factor E2FC 
 cit-r.1   102625601   transcription factor E2FC 
 sly-u.5   101248386   transcription factor E2FC 
 sot-r.1   102594398   transcription factor E2FC 
 nta-r.1   107781702   transcription factor E2FC-like 

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Top 50 coexpressed genes to 11428881 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11428881 (mtr-u.5 coexpression data)

CoexMap"11428881"


mtrLOC11428881 | Entrez gene ID : 11428881      
Species mtr gma ath bra vvi bna cit sly sot nta bdi osa tae ppo zma cre sbi ghi hvu
Paralog 3 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (425 genes)  IEA  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription regulator complex  (89 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (185 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (234 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (607 genes)  IEA  
Protein XP_024633944.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1  (predict for XP_024633944.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_024633944.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11428881
mtr-r.5
for
11428881
mtr-m.5
for
11428881
gma-u.5
for
100797301
ath-u.5
for
ATE2F2
bra-r.6
for
103833054
vvi-u.5
for
100247139
bna-r.1
for
106429362
cit-r.1
for
102625601
sly-u.5
for
101248386
sot-r.1
for
102594398
nta-r.1
for
107781702


Ortholog ID: 14065
Species mtr gma ath bra vvi bna cit sly sot nta
Symbol LOC11428881 LOC100797301 ATE2F2 LOC103833054 LOC100247139 LOC106429362 LOC102625601 LOC101248386 LOC102594398 LOC107781702
Function* transcription factor E2FC transcription factor E2FC winged-helix DNA-binding transcription factor family protein transcription factor E2FC transcription factor E2FC transcription factor E2FC transcription factor E2FC transcription factor E2FC transcription factor E2FC transcription factor E2FC-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03420 Nucleotide excision repair 4
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 5
sly00010 Glycolysis / Gluconeogenesis 4
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
sly03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 9
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11428881 100797301 841202 103833054 100247139 106429362 102625601 101248386 102594398 107781702
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