ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11429776	uncharacterized LOC11429776
mtr-u.5	11442030	uncharacterized LOC11442030
gma-u.5	100807168	uncharacterized LOC100807168
gma-u.5	100809377	uncharacterized LOC100809377
gma-u.5	102665859	uncharacterized LOC102665859
ppo-u.5	18098688	uncharacterized LOC18098688
ppo-u.5	7475960	uncharacterized LOC7475960
ppo-u.5	7481747	uncharacterized LOC7481747
ath-u.5	AT2G47820	arginine-glutamic acid dipeptide repeat protein
bra-r.6	103858259	uncharacterized LOC103858259
vvi-u.5	104879764	uncharacterized LOC104879764
vvi-u.5	100254594	uncharacterized LOC100254594
vvi-u.5	100245979	uncharacterized LOC100245979
ghi-r.1	107899093	uncharacterized LOC107899093
ghi-r.1	107908673	uncharacterized LOC107908673
ghi-r.1	107894224	uncharacterized LOC107894224
bna-r.1	106438363	uncharacterized LOC106438363
bna-r.1	111214058	uncharacterized LOC111214058
cit-r.1	102612976	uncharacterized LOC102612976
cit-r.1	102624452	uncharacterized LOC102624452
cit-r.1	102629830	uncharacterized LOC102629830
sly-u.5	101254833	uncharacterized LOC101254833
sot-r.1	102604919	uncharacterized LOC102604919
nta-r.1	107761674	uncharacterized LOC107761674
nta-r.1	107774544	uncharacterized LOC107774544
osa-u.5	4332820	uncharacterized LOC4332820
osa-u.5	4343640	uncharacterized LOC4343640
zma-u.5	100279470	uncharacterized LOC100279470
zma-u.5	100381518	uncharacterized LOC100381518
zma-u.5	103634765	uncharacterized LOC103634765
tae-r.2	123164571	uncharacterized LOC123164571
tae-r.2	123188215	uncharacterized LOC123188215
tae-r.2	123097484	uncharacterized LOC123097484
hvu-r.1	123448654	uncharacterized LOC123448654
hvu-r.1	123409883	uncharacterized LOC123409883
hvu-r.1	123425653	uncharacterized LOC123425653
sbi-r.1	8082297	uncharacterized LOC8082297
sbi-r.1	8081767	uncharacterized LOC8081767
bdi-r.1	100839331	uncharacterized LOC100839331
bdi-r.1	100836195	uncharacterized LOC100836195
bdi-r.1	100831208	uncharacterized LOC100831208

Top 50 coexpressed genes to 11429776 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11429776 (mtr-u.5 coexpression data)

CoexMap"11434615"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(2707 genes)

IEA

GO MF

GO:0003714 [list] [network] transcription corepressor activity

(61 genes)

IEA

Protein

XP_024626877.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3

(predict for XP_024626877.1)

Subcellular
localization
TargetP

other 8

(predict for XP_024626877.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11429776	mtr-u.5 for 11442030	gma-u.5 for 100807168	gma-u.5 for 100809377	gma-u.5 for 102665859	ppo-u.5 for 18098688	ppo-u.5 for 7475960	ppo-u.5 for 7481747	ath-u.5 for AT2G47820	bra-r.6 for 103858259	vvi-u.5 for 104879764	vvi-u.5 for 100254594	vvi-u.5 for 100245979	ghi-r.1 for 107899093	ghi-r.1 for 107908673	ghi-r.1 for 107894224	bna-r.1 for 106438363	bna-r.1 for 111214058	cit-r.1 for 102612976	cit-r.1 for 102624452	cit-r.1 for 102629830	sly-u.5 for 101254833	sot-r.1 for 102604919	nta-r.1 for 107761674	nta-r.1 for 107774544	osa-u.5 for 4332820	osa-u.5 for 4343640	zma-u.5 for 100279470	zma-u.5 for 100381518	zma-u.5 for 103634765	tae-r.2 for 123164571	tae-r.2 for 123188215	tae-r.2 for 123097484	hvu-r.1 for 123448654	hvu-r.1 for 123409883	hvu-r.1 for 123425653	sbi-r.1 for 8082297	sbi-r.1 for 8081767	bdi-r.1 for 100839331	bdi-r.1 for 100836195	bdi-r.1 for 100831208

Ortholog

Ortholog ID: 1969

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC11442030

uncharacterized LOC100807168

uncharacterized LOC102661961

uncharacterized LOC18098688

uncharacterized LOC7481747

uncharacterized LOC18110907

arginine-glutamic acid dipeptide repeat protein

uncharacterized LOC103858259

uncharacterized LOC104879764

uncharacterized LOC100254594

uncharacterized LOC100245979

uncharacterized LOC107908673

uncharacterized LOC107893648

uncharacterized LOC107910806

uncharacterized LOC106438363

uncharacterized LOC111214058

uncharacterized LOC102612976

uncharacterized LOC102624452

uncharacterized LOC102629830

uncharacterized LOC101254833

uncharacterized LOC102604919

uncharacterized LOC107761674

uncharacterized LOC107774544

uncharacterized LOC4332820

uncharacterized LOC4343640

uncharacterized LOC100279470

uncharacterized LOC100381518

uncharacterized LOC103634765

uncharacterized LOC123085836

uncharacterized LOC123091973

uncharacterized LOC123091983

uncharacterized LOC123448654

uncharacterized LOC123425653

uncharacterized LOC123448652

uncharacterized LOC8082297

uncharacterized LOC8081767

uncharacterized LOC100839331

uncharacterized LOC100836195

uncharacterized LOC100828743

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	3
ppo00300	Lysine biosynthesis	2
ppo01230	Biosynthesis of amino acids	2
ppo03030	DNA replication	2
ppo03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00562	Inositol phosphate metabolism	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04626	Plant-pathogen interaction	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03030	DNA replication	2
bdi03420	Nucleotide excision repair	2
bdi03430	Mismatch repair	2
bdi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00561	Glycerolipid metabolism	2
bdi00564	Glycerophospholipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

11442030

100807168

102661961

18098688

7481747

18110907

819394

103858259

104879764

100254594

100245979

107908673

107893648

107910806

106438363

111214058

102612976

102624452

102629830

101254833

102604919

107761674

107774544

4332820

4343640

100279470

100381518

103634765

123085836

123091973

123091983

123448654

123425653

123448652

8082297

8081767

100839331

100836195

100828743

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	3	1	1	3	3	2	3	1	1	2	2	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11429776 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11429776 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**