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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-m.5   11440485   ubiquitin carboxyl-terminal hydrolase 21 
 mtr-u.5   11424860   ubiquitin carboxyl-terminal hydrolase 20 
 gma-u.5   100806936   ubiquitin carboxyl-terminal hydrolase 20 
 gma-u.5   100808015   ubiquitin carboxyl-terminal hydrolase 20 
 ppo-u.5   18096977   ubiquitin carboxyl-terminal hydrolase 24 
 ath-u.5   UBP20   ubiquitin-specific protease 20 
 ath-u.5   UBP21   ubiquitin-specific protease 21 
 vvi-u.5   104882327   ubiquitin carboxyl-terminal hydrolase 21 
 sly-u.5   101244309   ubiquitin carboxyl-terminal hydrolase 20 
 osa-u.5   4330388   ubiquitin carboxyl-terminal hydrolase 21 
 zma-u.5   103627580   ubiquitin carboxyl-terminal hydrolase 21 
 zma-u.5   103653937   ubiquitin carboxyl-terminal hydrolase 21 

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Top 50 coexpressed genes to 11440485 (mtr-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11440485 (mtr-m.5 coexpression data)

CoexMap"11440485"


mtrLOC11440485 | Entrez gene ID : 11440485    
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (75 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (784 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (60 genes)  IEA  
Protein XP_003628811.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003628811.3)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_003628811.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-m.5
for
11440485
mtr-u.5
for
11424860
gma-u.5
for
100806936
gma-u.5
for
100808015
ppo-u.5
for
18096977
ath-u.5
for
UBP20
ath-u.5
for
UBP21
vvi-u.5
for
104882327
sly-u.5
for
101244309
osa-u.5
for
4330388
zma-u.5
for
103627580
zma-u.5
for
103653937


Ortholog ID: 3246
Species mtr gma gma ppo ath ath bra bra vvi ghi ghi bna cit nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC11424860 LOC100806936 LOC100808015 LOC18096977 UBP20 UBP21 LOC103827712 LOC103853739 LOC104882327 LOC107924804 LOC107950189 LOC106381839 LOC102625507 LOC107814694 LOC107771185 LOC4330388 LOC103653937 LOC103627580 LOC123137837 LOC123145148 LOC123403787 LOC8073183 LOC100831961
Function* ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin-specific protease 20 ubiquitin-specific protease 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 20 uncharacterized LOC107771185 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21 ubiquitin carboxyl-terminal hydrolase 21-like ubiquitin carboxyl-terminal hydrolase 20 ubiquitin carboxyl-terminal hydrolase 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 3
mtr01232 Nucleotide metabolism 3
mtr03030 DNA replication 2
mtr03440 Homologous recombination 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03410 Base excision repair 6
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03440 Homologous recombination 4
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03410 Base excision repair 4
vvi03420 Nucleotide excision repair 4
vvi03430 Mismatch repair 3
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 9
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 4
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 3
bdi00270 Cysteine and methionine metabolism 2
bdi03440 Homologous recombination 2
bdi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11424860 100806936 100808015 18096977 827513 834717 103827712 103853739 104882327 107924804 107950189 106381839 102625507 107814694 107771185 4330388 103653937 103627580 123137837 123145148 123403787 8073183 100831961
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