ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	25495857	probable polygalacturonase At3g15720
gma-u.5	100787465	probable polygalacturonase At1g80170
sly-u.5	PGcat	polygalacturonase
sly-u.5	101256371	probable polygalacturonase At3g15720
sot-r.1	102602941	probable polygalacturonase At3g15720
nta-r.1	107761023	putative polygalacturonase At3g15720
nta-r.1	107767548	putative polygalacturonase At3g15720
nta-r.1	107776714	putative polygalacturonase At3g15720
tae-r.2	123041778	polygalacturonase ADPG1-like

functional annotation

KEGG

mtr00040 [list] [network] Pentose and glucuronate interconversions (147 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(842 genes)

IEA

GO CC

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(67 genes)

IEA

Protein

XP_003601689.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, cysk_nucl 1, nucl_plas 1

(predict for XP_003601689.2)

Subcellular
localization
TargetP

mito 2

(predict for XP_003601689.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25495857	gma-u.5 for 100787465	sly-u.5 for PGcat	sly-u.5 for 101256371	sot-r.1 for 102602941	nta-r.1 for 107761023	nta-r.1 for 107767548	nta-r.1 for 107776714	tae-r.2 for 123041778

Ortholog ID: 2099

Species

mtr

gma

sly

sot

nta

tae

Symbol

PGcat

Function^*

probable polygalacturonase At3g15720

probable polygalacturonase At1g80170

polygalacturonase

probable polygalacturonase At3g15720

putative polygalacturonase At3g15720

polygalacturonase ADPG1-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00511	Other glycan degradation	2
sly04142	Lysosome	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00920	Sulfur metabolism	3
sly01320	Sulfur cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01212	Fatty acid metabolism	3
sot00061	Fatty acid biosynthesis	2
sot00780	Biotin metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	3
nta04075	Plant hormone signal transduction	3
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	2

Expression

Expression pattern

Entrez Gene ID^*

25495857

100787465

543587

101256371

102602941

107761023

107776714

107770857

123049740


Species	mtr	gma	sly	sot	nta	tae	cre	vvi	bra	ath	ppo	hvu	bna	bdi	osa	zma	cit	ghi	sbi
Paralog	1	1	2	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 25495857 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25495857 (mtr-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25495857 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25495857 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**