ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11444173	calcineurin subunit B
mtr-r.5	11444173	calcineurin subunit B
mtr-m.5	11444173	calcineurin subunit B
mtr-u.5	11430021	calcineurin subunit B
gma-u.5	100500057	EF-hand, calcium binding motif-containing protein
gma-u.5	100305685	calcium-binding EF-hand family protein
ppo-u.5	7493381	uncharacterized LOC7493381
ppo-u.5	18096686	uncharacterized LOC18096686
ath-u.5	AT3G18430	Calcium-binding EF-hand family protein
bra-r.6	103865318	calcineurin subunit B
vvi-u.5	100263924	uncharacterized LOC100263924
vvi-u.5	100244675	uncharacterized LOC100244675
ghi-r.1	107957518	calcineurin subunit B
ghi-r.1	107948447	calcineurin subunit B
ghi-r.1	107889149	calcineurin subunit B
bna-r.1	125608290	calcineurin subunit B-like
bna-r.1	111215578	calcineurin subunit B
bna-r.1	106422938	calcineurin subunit B
cit-r.1	102624742	uncharacterized LOC102624742
cit-r.1	102618993	uncharacterized LOC102618993
sly-u.5	101250979	uncharacterized LOC101250979
sly-u.5	101250315	uncharacterized LOC101250315
sot-r.1	102583146	calcineurin subunit B
nta-r.1	107776629	uncharacterized LOC107776629
nta-r.1	107809013	uncharacterized LOC107809013
nta-r.1	107809995	uncharacterized LOC107809995
osa-u.5	4331043	uncharacterized LOC4331043
osa-u.5	4345696	uncharacterized LOC4345696
zma-u.5	100284760	calcineurin subunit B
zma-u.5	100193443	calcineurin subunit B
zma-u.5	100285425	calcineurin subunit B
tae-r.2	123104198	calcineurin subunit B
tae-r.2	123112446	calcineurin subunit B
tae-r.2	123128830	calcineurin subunit B
hvu-r.1	123399474	calcineurin subunit B-like
hvu-r.1	123404312	calcineurin subunit B-like
sbi-r.1	8056398	calcineurin subunit B
sbi-r.1	8080614	calcineurin subunit B
bdi-r.1	100831571	calcineurin subunit B
bdi-r.1	100837996	calcineurin subunit B
cre-r.1	CHLRE_15g641250v5	uncharacterized protein

Top 50 coexpressed genes to 11444173 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11444173 (mtr-u.5 coexpression data)

CoexMap"11444173"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding

(278 genes)

IEA

Protein

XP_003610274.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, chlo 2

(predict for XP_003610274.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003610274.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11444173	mtr-r.5 for 11444173	mtr-m.5 for 11444173	mtr-u.5 for 11430021	gma-u.5 for 100500057	gma-u.5 for 100305685	ppo-u.5 for 7493381	ppo-u.5 for 18096686	ath-u.5 for AT3G18430	bra-r.6 for 103865318	vvi-u.5 for 100263924	vvi-u.5 for 100244675	ghi-r.1 for 107957518	ghi-r.1 for 107948447	ghi-r.1 for 107889149	bna-r.1 for 125608290	bna-r.1 for 111215578	bna-r.1 for 106422938	cit-r.1 for 102624742	cit-r.1 for 102618993	sly-u.5 for 101250979	sly-u.5 for 101250315	sot-r.1 for 102583146	nta-r.1 for 107776629	nta-r.1 for 107809013	nta-r.1 for 107809995	osa-u.5 for 4331043	osa-u.5 for 4345696	zma-u.5 for 100284760	zma-u.5 for 100193443	zma-u.5 for 100285425	tae-r.2 for 123104198	tae-r.2 for 123112446	tae-r.2 for 123128830	hvu-r.1 for 123399474	hvu-r.1 for 123404312	sbi-r.1 for 8056398	sbi-r.1 for 8080614	bdi-r.1 for 100831571	bdi-r.1 for 100837996	cre-r.1 for CHLRE_15g641250v5

Ortholog

Ortholog ID: 3461

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

calcineurin subunit B

EF-hand, calcium binding motif-containing protein

calcium-binding EF-hand family protein

uncharacterized LOC7493381

uncharacterized LOC18096686

Calcium-binding EF-hand family protein

calcineurin subunit B

uncharacterized LOC100263924

uncharacterized LOC100244675

calcineurin subunit B

calcineurin subunit B-like

calcineurin subunit B

uncharacterized LOC102624742

uncharacterized LOC102618993

uncharacterized LOC101250979

uncharacterized LOC101250315

calcineurin subunit B

uncharacterized LOC107776629

uncharacterized LOC107809995

uncharacterized LOC107820601

uncharacterized LOC4331043

uncharacterized LOC4345696

calcineurin subunit B

calcineurin subunit B-like

calcineurin subunit B

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	4
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	4
gma04144	Endocytosis	2
gma04517	IgSF CAM signaling	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	5
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra04145	Phagosome	5
bra04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00020	Citrate cycle (TCA cycle)	2
ghi00270	Cysteine and methionine metabolism	2
ghi00566	Sulfoquinovose metabolism	2
ghi00620	Pyruvate metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00592	alpha-Linolenic acid metabolism	2
sly00061	Fatty acid biosynthesis	2
sly01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot03420	Nucleotide excision repair	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	4
nta02010	ABC transporters	2
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	3
zma00740	Riboflavin metabolism	2
zma04142	Lysosome	2
zma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04070	Phosphatidylinositol signaling system	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3
bdi03050	Proteasome	3
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00710	Carbon fixation by Calvin cycle	2
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

11444173

11430021

100500057

100305685

100305475

7493381

18096686

821372

103865318

100263924

100244675

107957518

107948447

107899388

125608290

106422938

106451207

102624742

102618993

101250979

101250315

102583146

107776629

107809995

107820601

4331043

4345696

100284760

100193443

100285425

123104198

123139266

123121960

123399474

123404312

8056398

8080614

100831571

100837996

5728626

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	1	1	2	3	3	2	2	1	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11444173 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11444173 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**