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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103854393   putative pentatricopeptide repeat-containing protein At3g25970 
 ath-u.5   AT3G25970   Pentatricopeptide repeat (PPR) superfamily protein 
 ghi-r.1   107953722   putative pentatricopeptide repeat-containing protein At3g25970 
 ghi-r.1   121232005   putative pentatricopeptide repeat-containing protein At3g25970 
 gma-u.5   100775946   putative pentatricopeptide repeat-containing protein At3g25970 
 vvi-u.5   100249134   putative pentatricopeptide repeat-containing protein At3g25970 
 sly-u.5   101262456   putative pentatricopeptide repeat-containing protein At3g25970 
 sot-r.1   102590648   putative pentatricopeptide repeat-containing protein At3g25970 
 nta-r.1   107775888   putative pentatricopeptide repeat-containing protein At3g25970 
 nta-r.1   107817735   putative pentatricopeptide repeat-containing protein At3g25970 
 osa-u.5   4345420   putative pentatricopeptide repeat-containing protein At3g25970 
 zma-u.5   103640633   putative pentatricopeptide repeat-containing protein At3g25970 
 tae-r.2   123135703   putative pentatricopeptide repeat-containing protein At3g25970 
 tae-r.2   123131807   putative pentatricopeptide repeat-containing protein At3g25970 
 tae-r.2   123143270   putative pentatricopeptide repeat-containing protein At3g25970 
 hvu-r.1   123402088   putative pentatricopeptide repeat-containing protein At3g25970 
 bdi-r.1   100835192   putative pentatricopeptide repeat-containing protein At3g25970 

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Top 50 coexpressed genes to 103854393 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103854393 (bra-r.6 coexpression data)

CoexMap"117131704"


braLOC117131704 | Entrez gene ID : 117131704    
Species bra ath ghi gma vvi sly sot nta osa zma tae hvu bdi bna ppo cre mtr sbi cit
Paralog 1 1 2 1 1 1 1 2 1 1 3 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (422 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_033139832.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for XP_033139832.1)
Subcellular
localization
TargetP
other 4  (predict for XP_033139832.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103854393
ath-u.5
for
AT3G25970
ghi-r.1
for
107953722
ghi-r.1
for
121232005
gma-u.5
for
100775946
vvi-u.5
for
100249134
sly-u.5
for
101262456
sot-r.1
for
102590648
nta-r.1
for
107775888
nta-r.1
for
107817735
osa-u.5
for
4345420
zma-u.5
for
103640633
tae-r.2
for
123135703
tae-r.2
for
123131807
tae-r.2
for
123143270
hvu-r.1
for
123402088
bdi-r.1
for
100835192


Ortholog ID: 10114
Species bra ath ghi ghi gma vvi sly sot nta nta osa zma tae tae tae hvu bdi
Symbol LOC103854393 AT3G25970 LOC107953722 LOC121232005 LOC100775946 LOC100249134 LOC101262456 LOC102590648 LOC107775888 LOC107817735 LOC4345420 LOC103640633 LOC123135703 LOC123131807 LOC123143270 LOC123402088 LOC100835192
Function* putative pentatricopeptide repeat-containing protein At3g25970 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103854393 822194 107953722 121232005 100775946 100249134 101262456 102590648 107775888 107817735 4345420 103640633 123135703 123131807 123143270 123402088 100835192
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