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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4345420  putative pentatricopeptide repeat-containing protein At3g25970 
 osa-r.6  4345420  putative pentatricopeptide repeat-containing protein At3g25970 
 osa-m.8  4345420  putative pentatricopeptide repeat-containing protein At3g25970 
 osa-e.1  4345420  putative pentatricopeptide repeat-containing protein At3g25970 
 zma-u.5  103640633  putative pentatricopeptide repeat-containing protein At3g25970 
 ath-u.5  AT3G25970  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  100775946  putative pentatricopeptide repeat-containing protein At3g25970 
 sly-u.5  101262456  putative pentatricopeptide repeat-containing protein At3g25970 
 vvi-u.5  100249134  putative pentatricopeptide repeat-containing protein At3g25970 

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Top 50 coexpressed genes to 4345420 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4345420 (osa-u.5 coexpression data)

CoexMap"4345420"


osaLOC4345420 | Entrez gene ID : 4345420
Species osa zma ath gma sly vvi tae mtr hvu ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 4 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_066159660.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_066159660.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_066159660.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4345420

.

osa-r.6
for
4345420

.

osa-m.8
for
4345420

.

osa-e.1
for
4345420

.

zma-u.5
for
103640633

.

ath-u.5
for
AT3G25970

.

gma-u.5
for
100775946

.

sly-u.5
for
101262456

.

vvi-u.5
for
100249134

.


Ortholog ID: 10114
Species ath gma sly osa zma bra vvi tae tae hvu ghi ghi sot bdi nta nta
Symbol AT3G25970 LOC100775946 LOC101262456 LOC4345420 LOC103640633 LOC103854393 LOC100249134 LOC123143270 LOC123131807 LOC123402088 LOC107953722 LOC121232005 LOC102590648 LOC100835192 LOC107817735 LOC107775888
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970 putative pentatricopeptide repeat-containing protein At3g25970
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822194 100775946 101262456 4345420 103640633 103854393 100249134 123143270 123131807 123402088 107953722 121232005 102590648 100835192 107817735 107775888
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