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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103625968   pre-mRNA-splicing factor 18 
 zma-u.5   103642837   pre-mRNA-splicing factor 18 
 zma-u.5   103633324   pre-mRNA-splicing factor 18-like 
 sbi-r.1   8083903   pre-mRNA-splicing factor 18 
 sbi-r.1   8063417   pre-mRNA-splicing factor 18 
 osa-u.5   4343671   pre-mRNA-splicing factor 18 
 osa-u.5   4333826   uncharacterized LOC4333826 
 tae-r.2   123082387   pre-mRNA-splicing factor 18-like 
 tae-r.2   123044478   pre-mRNA-splicing factor 18 
 tae-r.2   123052339   pre-mRNA-splicing factor 18 
 hvu-r.1   123425621   pre-mRNA-splicing factor 18 
 bdi-r.1   100841185   pre-mRNA-splicing factor 18 
 bdi-r.1   100827350   pre-mRNA-splicing factor 18 
 ath-u.5   AT1G03140   splicing factor Prp18 family protein 
 gma-u.5   100785799   pre-mRNA-splicing factor 18 
 gma-u.5   100798833   pre-mRNA-splicing factor 18 
 sly-u.5   101257403   uncharacterized LOC101257403 
 bra-r.6   103836632   pre-mRNA-splicing factor 18 
 bra-r.6   103843705   pre-mRNA-splicing factor 18 
 vvi-u.5   100247737   uncharacterized LOC100247737 
 ppo-u.5   7464681   uncharacterized LOC7464681 
 mtr-u.5   25499124   pre-mRNA-splicing factor 18 
 ghi-r.1   121219915   pre-mRNA-splicing factor 18 
 ghi-r.1   107951791   pre-mRNA-splicing factor 18 
 ghi-r.1   107914671   pre-mRNA-splicing factor 18 
 bna-r.1   106401185   pre-mRNA-splicing factor 18 
 bna-r.1   125578254   pre-mRNA-splicing factor 18-like 
 bna-r.1   106405767   pre-mRNA-splicing factor 18 
 sot-r.1   102596855   pre-mRNA-splicing factor 18-like 
 sot-r.1   102588693   pre-mRNA-splicing factor 18 
 sot-r.1   102597507   pre-mRNA-splicing factor 18-like 
 cit-r.1   102611778   uncharacterized LOC102611778 
 nta-r.1   107819290   uncharacterized LOC107819290 
 nta-r.1   107789251   uncharacterized LOC107789251 
 nta-r.1   107760550   uncharacterized LOC107760550 
 cre-r.1   CHLRE_13g567750v5   uncharacterized protein 

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Top 50 coexpressed genes to 103625968 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103625968 (zma-u.5 coexpression data)

CoexMap"118473598"


zmaLOC118473598 | Entrez gene ID : 118473598    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 2 3 1 2 1 2 1 2 1 1 1 3 3 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (10 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (207 genes)  IEA  
GO CC
GO:0071021 [list] [network] U2-type post-spliceosomal complex  (9 genes)  IEA  
GO:0005682 [list] [network] U5 snRNP  (23 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (31 genes)  IEA  
GO MF
Protein XP_035819399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 2,  cysk_nucl 2  (predict for XP_035819399.1)
Subcellular
localization
TargetP
other 6  (predict for XP_035819399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103625968
zma-u.5
for
103642837
zma-u.5
for
103633324
sbi-r.1
for
8083903
sbi-r.1
for
8063417
osa-u.5
for
4343671
osa-u.5
for
4333826
tae-r.2
for
123082387
tae-r.2
for
123044478
tae-r.2
for
123052339
hvu-r.1
for
123425621
bdi-r.1
for
100841185
bdi-r.1
for
100827350
ath-u.5
for
AT1G03140
gma-u.5
for
100785799
gma-u.5
for
100798833
sly-u.5
for
101257403
bra-r.6
for
103836632
bra-r.6
for
103843705
vvi-u.5
for
100247737
ppo-u.5
for
7464681
mtr-u.5
for
25499124
ghi-r.1
for
121219915
ghi-r.1
for
107951791
ghi-r.1
for
107914671
bna-r.1
for
106401185
bna-r.1
for
125578254
bna-r.1
for
106405767
sot-r.1
for
102596855
sot-r.1
for
102588693
sot-r.1
for
102597507
cit-r.1
for
102611778
nta-r.1
for
107819290
nta-r.1
for
107789251
nta-r.1
for
107760550
cre-r.1
for
CHLRE_13g567750v5


Ortholog ID: 3521
Species zma zma sbi sbi osa osa tae tae tae hvu bdi bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi ghi bna bna bna sot sot sot cit nta nta nta cre
Symbol LOC118473525 LOC100216989 LOC8083903 LOC8063417 LOC4343671 LOC4333826 LOC123052339 LOC123094312 LOC123099432 LOC123425621 LOC100841185 LOC100827350 AT1G03140 LOC100785799 LOC100798833 LOC101257403 LOC103836632 LOC103843705 LOC100247737 LOC7464681 LOC25499124 LOC121219915 LOC107951791 LOC107914671 LOC125578254 LOC106405767 LOC106400595 LOC102588693 LOC102597507 LOC107058193 LOC102611778 LOC107819290 LOC107789251 LOC107760550 CHLRE_13g567750v5
Function* pre-mRNA-splicing factor 18-like uncharacterized LOC100216989 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC4333826 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 splicing factor Prp18 family protein pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC101257403 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 uncharacterized LOC100247737 uncharacterized LOC7464681 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18 pre-mRNA-splicing factor 18-like pre-mRNA-splicing factor 18-like uncharacterized LOC102611778 uncharacterized LOC107819290 uncharacterized LOC107789251 uncharacterized LOC107760550 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 10
osa03040 Spliceosome 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 11
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 17
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 18
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 10
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03050 Proteasome 4
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 118473525 100216989 8083903 8063417 4343671 4333826 123052339 123094312 123099432 123425621 100841185 100827350 839567 100785799 100798833 101257403 103836632 103843705 100247737 7464681 25499124 121219915 107951791 107914671 125578254 106405767 106400595 102588693 102597507 107058193 102611778 107819290 107789251 107760550 5719078
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