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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   118475603   30S ribosomal protein S7, chloroplastic 
 zma-r.6   118475603   30S ribosomal protein S7, chloroplastic 
 zma-u.5   118474333   30S ribosomal protein S7, chloroplastic 
 zma-u.5   118473846   30S ribosomal protein S7, chloroplastic 
 zma-u.5   118473793   30S ribosomal protein S7, chloroplastic 
 sbi-r.1   rps7   ribosomal protein S7 
 sbi-r.1   rps7   ribosomal protein S7 
 osa-u.5   107278968   small ribosomal subunit protein uS7cz/uS7cy 
 osa-u.5   112937968   small ribosomal subunit protein uS7cz/uS7cy 
 osa-u.5   112938758   small ribosomal subunit protein uS7cz/uS7cy 
 tae-r.2   123044753   30S ribosomal protein S7, chloroplastic 
 tae-r.2   123146146   30S ribosomal protein S7, chloroplastic-like 
 tae-r.2   123148300   30S ribosomal protein S7, chloroplastic 
 hvu-r.1   123420584   30S ribosomal protein S7, chloroplastic 
 hvu-r.1   123419760   30S ribosomal protein S7, chloroplastic 
 hvu-r.1   123419611   30S ribosomal protein S7, chloroplastic 
 bdi-r.1   rps7   ribosomal protein S7 
 bdi-r.1   rps7   ribosomal protein S7 
 ath-u.5   rps7   ribosomal protein S7 
 ath-u.5   rps7   ribosomal protein S7 
 gma-u.5   rps7   30S ribosomal protein S7 
 gma-u.5   rps7   30S ribosomal protein S7 
 sly-u.5   rps7   ribosomal protein S7 
 sly-u.5   rps7   ribosomal protein S7 
 vvi-u.5   rps7   30S ribosomal protein S7 
 vvi-u.5   rps7   30S ribosomal protein S7 
 ppo-u.5   rps7   ribosomal protein S7 
 ppo-u.5   rps7   ribosomal protein S7 
 mtr-u.5   120580064   30S ribosomal protein S7, chloroplastic 
 mtr-u.5   120579658   30S ribosomal protein S7, chloroplastic 
 mtr-u.5   rps7   ribosomal protein S7 
 ghi-r.1   121210930   30S ribosomal protein S7, chloroplastic 
 ghi-r.1   121214734   30S ribosomal protein S7, chloroplastic 
 ghi-r.1   121229165   30S ribosomal protein S7, chloroplastic 
 bna-r.1   rps7   ribosomal protein S7 
 bna-r.1   125595048   30S ribosomal protein S7, chloroplastic 
 bna-r.1   125602848   30S ribosomal protein S7, chloroplastic 
 sot-r.1   rps7   ribosomal protein S7 
 sot-r.1   rps7   ribosomal protein S7 
 cit-r.1   rps7   ribosomal protein S7 
 cit-r.1   rps7   ribosomal protein S7 
 cit-r.1   rps7   ribosomal protein S7 
 nta-r.1   rps7   30S ribosomal protein S7 
 nta-r.1   rps7   30S ribosomal protein S7 

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Top 50 coexpressed genes to 118475603 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 118475603 (zma-u.5 coexpression data)

CoexMap"118475603"


zmaLOC118475603 | Entrez gene ID : 118475603    
Species zma sbi osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre
Paralog 5 2 3 3 3 2 2 2 2 2 2 3 3 3 2 3 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0006412 [list] [network] translation  (661 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (128 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein XP_035819776.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_035819776.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_035819776.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
118475603
zma-r.6
for
118475603
zma-u.5
for
118474333
zma-u.5
for
118473846
zma-u.5
for
118473793
sbi-r.1
for
rps7
sbi-r.1
for
rps7
osa-u.5
for
107278968
osa-u.5
for
112937968
osa-u.5
for
112938758
tae-r.2
for
123044753
tae-r.2
for
123146146
tae-r.2
for
123148300
hvu-r.1
for
123420584
hvu-r.1
for
123419760
hvu-r.1
for
123419611
bdi-r.1
for
rps7
bdi-r.1
for
rps7
ath-u.5
for
rps7
ath-u.5
for
rps7
gma-u.5
for
rps7
gma-u.5
for
rps7
sly-u.5
for
rps7
sly-u.5
for
rps7
vvi-u.5
for
rps7
vvi-u.5
for
rps7
ppo-u.5
for
rps7
ppo-u.5
for
rps7
mtr-u.5
for
120580064
mtr-u.5
for
120579658
mtr-u.5
for
rps7
ghi-r.1
for
121210930
ghi-r.1
for
121214734
ghi-r.1
for
121229165
bna-r.1
for
rps7
bna-r.1
for
125595048
bna-r.1
for
125602848
sot-r.1
for
rps7
sot-r.1
for
rps7
cit-r.1
for
rps7
cit-r.1
for
rps7
cit-r.1
for
rps7
nta-r.1
for
rps7
nta-r.1
for
rps7


Ortholog ID: 598
Species zma zma zma sbi sbi osa osa osa tae tae hvu bdi bdi ath ath gma gma sly sly vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit cit cit nta nta
Symbol LOC118475017 LOC118474762 LOC118475033 rps7 rps7 LOC112938758 LOC107280672 rps7 LOC123148300 LOC123180807 LOC123420945 rps7 rps7 rps7 rps7 rps7 rps7 rps7 rps7 rps7 rps7 rps7 LOC18097782 LOC120580064 LOC120579658 rps7 LOC121210930 LOC121214734 LOC107931912 rps7 LOC125602848 rps7 rps7 rps7 rps7 rps7 rps7 rps7 rps7
Function* 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic ribosomal protein S7 ribosomal protein S7 small ribosomal subunit protein uS7cz/uS7cy small ribosomal subunit protein uS7cz/uS7cy ribosomal protein S7 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 30S ribosomal protein S7 30S ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 30S ribosomal protein S7 30S ribosomal protein S7 ribosomal protein S7 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic ribosomal protein S7 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic 30S ribosomal protein S7, chloroplastic ribosomal protein S7 30S ribosomal protein S7, chloroplastic ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 ribosomal protein S7 30S ribosomal protein S7 30S ribosomal protein S7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa00190 Oxidative phosphorylation 4
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 12
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 9
bdi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi00190 Oxidative phosphorylation 8
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 8
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00190 Oxidative phosphorylation 3
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00970 Aminoacyl-tRNA biosynthesis 5
sly00190 Oxidative phosphorylation 4
sly00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi00195 Photosynthesis 8
vvi00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 9
vvi00195 Photosynthesis 8
vvi03010 Ribosome 7
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo00195 Photosynthesis 5
ppo00190 Oxidative phosphorylation 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03010 Ribosome 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03010 Ribosome 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 5
mtr03010 Ribosome 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00190 Oxidative phosphorylation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00190 Oxidative phosphorylation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00190 Oxidative phosphorylation 5
sot00970 Aminoacyl-tRNA biosynthesis 4
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 5
sot00970 Aminoacyl-tRNA biosynthesis 4
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00190 Oxidative phosphorylation 6
nta00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00190 Oxidative phosphorylation 7
nta00195 Photosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 118475017 118474762 118475033 4549157 4549187 112938758 107280672 3131444 123148300 123180807 123420945 6439826 6439812 844712 4386140 3989343 3989376 3950463 16976776 4025062 4025013 4929722 18097782 120580064 120579658 5333126 121210930 121214734 107931912 11542091 125602848 11542047 4099921 4099892 4271171 4271161 36487042 800447 800428
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