ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	120578204	chaperone protein dnaJ 49
mtr-r.5	120578204	chaperone protein dnaJ 49
mtr-u.5	25488116	chaperone protein dnaJ 49
mtr-u.5	25488117	chaperone protein dnaJ 49
gma-u.5	100793797	chaperone protein dnaJ 49
gma-u.5	100820432	chaperone protein dnaJ 49
gma-u.5	100788812	chaperone protein dnaJ 49
ppo-u.5	7496690	chaperone protein dnaJ 49
ppo-u.5	7484682	chaperone protein dnaJ 49
ath-u.5	AT3G57340	DnaJ heat shock amino-terminal domain protein (DUF1977)
ath-u.5	AT5G05750	DNAJ heat shock N-terminal domain-containing protein
ath-u.5	AT5G49060	DnaJ heat shock amino-terminal domain protein (DUF1977)
vvi-u.5	100267066	chaperone protein dnaJ 49
vvi-u.5	100262992	chaperone protein dnaJ 49
sly-u.5	101261306	chaperone protein dnaJ 49
sly-u.5	101255429	chaperone protein dnaJ 49
sly-u.5	101246246	chaperone protein dnaJ 49
osa-u.5	4338551	chaperone protein dnaJ 49
osa-u.5	4324566	chaperone protein dnaJ 49
zma-u.5	103651627	chaperone protein dnaJ 49-like
zma-u.5	103635523	chaperone protein dnaJ 49
zma-u.5	100272688	uncharacterized LOC100272688

Top 50 coexpressed genes to 120578204 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 120578204 (mtr-u.5 coexpression data)

CoexMap"120578204"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr04141 [list] [network] Protein processing in endoplasmic reticulum (256 genes)

GO BP

GO:0071218 [list] [network] cellular response to misfolded protein

(4 genes)

IEA

GO CC

GO:0005789 [list] [network] endoplasmic reticulum membrane

(218 genes)

IEA

GO MF

GO:0030544 [list] [network] Hsp70 protein binding

(15 genes)

IEA

Protein

XP_039686515.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3, cysk_nucl 3

(predict for XP_039686515.1)

Subcellular
localization
TargetP

other 9

(predict for XP_039686515.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 120578204	mtr-r.5 for 120578204	mtr-u.5 for 25488116	mtr-u.5 for 25488117	gma-u.5 for 100793797	gma-u.5 for 100820432	gma-u.5 for 100788812	ppo-u.5 for 7496690	ppo-u.5 for 7484682	ath-u.5 for AT3G57340	ath-u.5 for AT5G05750	ath-u.5 for AT5G49060	vvi-u.5 for 100267066	vvi-u.5 for 100262992	sly-u.5 for 101261306	sly-u.5 for 101255429	sly-u.5 for 101246246	osa-u.5 for 4338551	osa-u.5 for 4324566	zma-u.5 for 103651627	zma-u.5 for 103635523	zma-u.5 for 100272688

Ortholog

Ortholog ID: 2348

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

chaperone protein dnaJ 49

DnaJ heat shock amino-terminal domain protein (DUF1977)

chaperone protein dnaJ 49

chaperone protein dnaJ 49-like

chaperone protein dnaJ 49

chaperone protein dnaJ 49-like

chaperone protein dnaJ 49

chaperone protein dnaJ 49-like

uncharacterized LOC100272688

chaperone protein dnaJ 49

chaperone protein dnaJ 49-like

chaperone protein dnaJ 49

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4
mtr03015	mRNA surveillance pathway	3
mtr03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2
gma00190	Oxidative phosphorylation	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra04144	Endocytosis	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	6
bra04144	Endocytosis	3
bra03250	Viral life cycle - HIV-1	2
bra03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	4
vvi03250	Viral life cycle - HIV-1	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04144	Endocytosis	2
ghi04142	Lysosome	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2
cit03015	mRNA surveillance pathway	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04142	Lysosome	2
sly03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	3
zma03022	Basal transcription factors	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	6
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00590	Arachidonic acid metabolism	2
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	3
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

120578204

25488116

100789271

100788812

7484682

7496690

824901

834965

103846916

103841641

100267066

100262992

107912449

106419459

106415408

102625062

102612711

101255429

101246246

102596925

102583358

107803653

107825773

4338551

4324566

103651627

100272688

123061274

123129654

123443733

123440587

110433821

8077903

100828391

100832766

5722378

The preparation time of this page was 0.1 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	4	3	2	3	2	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 120578204 (mtr-u.5 coexpression data)

Top 50 enrichment test to 120578204 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**