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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   120578292   pentatricopeptide repeat-containing protein At4g16390, chloroplastic 
 mtr-r.5   120578292   pentatricopeptide repeat-containing protein At4g16390, chloroplastic 
 mtr-u.5   25486252   pentatricopeptide repeat-containing protein At4g16390, chloroplastic 

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Top 50 coexpressed genes to 120578292 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 120578292 (mtr-u.5 coexpression data)

CoexMap"120578292"


mtrLOC120578292 | Entrez gene ID : 120578292    
Species mtr vvi bdi bna ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre ath bra
Paralog 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045727 [list] [network] positive regulation of translation  (19 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (100 genes)  IEA  
GO MF
GO:0042134 [list] [network] rRNA primary transcript binding  (8 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_039686883.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  chlo 1,  nucl 1,  golg 1  (predict for XP_039686883.1)
Subcellular
localization
TargetP
other 8  (predict for XP_039686883.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
120578292
mtr-r.5
for
120578292
mtr-u.5
for
25486252


Ortholog ID: 35581
Species mtr mtr
Symbol LOC120578292 LOC25486252
Function* pentatricopeptide repeat-containing protein At4g16390, chloroplastic pentatricopeptide repeat-containing protein At4g16390, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 120578292 25486252
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