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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100802423   pentatricopeptide repeat-containing protein At2g01390 
 mtr-u.5   11415766   pentatricopeptide repeat-containing protein At2g01390 
 ath-u.5   EMB3111   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103827591   pentatricopeptide repeat-containing protein At2g01390 
 vvi-u.5   100256542   pentatricopeptide repeat-containing protein At2g01390 
 ghi-r.1   107912002   pentatricopeptide repeat-containing protein At2g01390 
 ghi-r.1   121209657   pentatricopeptide repeat-containing protein At2g01390 
 bna-r.1   106349458   pentatricopeptide repeat-containing protein At2g01390 
 bna-r.1   106407315   pentatricopeptide repeat-containing protein At2g01390 
 bna-r.1   106416547   pentatricopeptide repeat-containing protein At2g01390 
 cit-r.1   102628183   pentatricopeptide repeat-containing protein At2g01390 
 sly-u.5   101265055   pentatricopeptide repeat-containing protein At2g01390 
 sot-r.1   102595430   pentatricopeptide repeat-containing protein At2g01390 
 nta-r.1   107829424   pentatricopeptide repeat-containing protein At2g01390 
 nta-r.1   107832206   pentatricopeptide repeat-containing protein At2g01390-like 
 osa-u.5   4348438   pentatricopeptide repeat-containing protein At2g01390 
 zma-u.5   100279199   uncharacterized LOC100279199 
 hvu-r.1   123413586   pentatricopeptide repeat-containing protein At2g01390-like 
 sbi-r.1   8058497   pentatricopeptide repeat-containing protein At2g01390 
 bdi-r.1   100831512   pentatricopeptide repeat-containing protein At2g01390 

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Top 50 coexpressed genes to 100802423 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100802423 (gma-u.5 coexpression data)

CoexMap"121174578"


gmaLOC121174578 | Entrez gene ID : 121174578    
Species gma mtr ath bra vvi ghi bna cit sly sot nta osa zma hvu sbi bdi ppo cre tae
Paralog 1 1 1 1 1 2 3 1 1 1 2 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_040869887.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  pero 1,  cysk 1  (predict for XP_040869887.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040869887.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100802423
mtr-u.5
for
11415766
ath-u.5
for
EMB3111
bra-r.6
for
103827591
vvi-u.5
for
100256542
ghi-r.1
for
107912002
ghi-r.1
for
121209657
bna-r.1
for
106349458
bna-r.1
for
106407315
bna-r.1
for
106416547
cit-r.1
for
102628183
sly-u.5
for
101265055
sot-r.1
for
102595430
nta-r.1
for
107829424
nta-r.1
for
107832206
osa-u.5
for
4348438
zma-u.5
for
100279199
hvu-r.1
for
123413586
sbi-r.1
for
8058497
bdi-r.1
for
100831512


Ortholog ID: 8859
Species gma mtr ath bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma hvu sbi bdi
Symbol LOC100802423 LOC11415766 EMB3111 LOC103827591 LOC100256542 LOC107912002 LOC121209657 LOC106349458 LOC106407315 LOC106416547 LOC102628183 LOC101265055 LOC102595430 LOC107829424 LOC107832206 LOC4348438 LOC100279199 LOC123413586 LOC8058497 LOC100831512
Function* pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390-like pentatricopeptide repeat-containing protein At2g01390 uncharacterized LOC100279199 pentatricopeptide repeat-containing protein At2g01390-like pentatricopeptide repeat-containing protein At2g01390 pentatricopeptide repeat-containing protein At2g01390
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00860 Porphyrin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00460 Cyanoamino acid metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100802423 11415766 814667 103827591 100256542 107912002 121209657 106349458 106407315 106416547 102628183 101265055 102595430 107829424 107832206 4348438 100279199 123413586 8058497 100831512
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