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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100783002   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 gma-u.5   100775818   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 mtr-u.5   25489495   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 ppo-u.5   7463104   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 ath-u.5   PDE312   Nucleic acid-binding, OB-fold-like protein 
 vvi-u.5   100264639   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 sly-u.5   CIP5   CONSTANS interacting protein 5 
 osa-u.5   4325010   protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 
 zma-u.5   100382312   Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 

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Top 50 coexpressed genes to 100783002 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100783002 (gma-u.5 coexpression data)

CoexMap"121174590"


gmaLOC121174590 | Entrez gene ID : 121174590    
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (9 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_040869935.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_040869935.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040869935.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100783002
gma-u.5
for
100775818
mtr-u.5
for
25489495
ppo-u.5
for
7463104
ath-u.5
for
PDE312
vvi-u.5
for
100264639
sly-u.5
for
CIP5
osa-u.5
for
4325010
zma-u.5
for
100382312


Ortholog ID: 9525
Species gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100775818 LOC25489495 LOC7463104 PDE312 LOC103874673 LOC100264639 LOC121219329 LOC121232058 LOC106376558 LOC106415569 LOC102625535 CIP5 LOC102591466 LOC107787150 LOC107780559 LOC4325010 LOC100382312 LOC123067688 LOC123080016 LOC123442022 LOC8056124 LOC100821290 CHLRE_07g348500v5
Function* protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 Nucleic acid-binding, OB-fold-like protein protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 CONSTANS interacting protein 5 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna04626 Plant-pathogen interaction 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00330 Arginine and proline metabolism 2
bna04626 Plant-pathogen interaction 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100775818 25489495 7463104 824009 103874673 100264639 121219329 121232058 106376558 106415569 102625535 778252 102591466 107787150 107780559 4325010 100382312 123067688 123080016 123442022 8056124 100821290 5718158
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