ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100780774	uncharacterized LOC100780774
gma-u.5	100784126	uncharacterized LOC100784126
mtr-u.5	11422472	uncharacterized LOC11422472
ppo-u.5	7487312	uncharacterized LOC7487312
ppo-u.5	7487467	uncharacterized LOC7487467
ath-u.5	AT5G01260	Carbohydrate-binding-like fold
bra-r.6	117132430	uncharacterized LOC117132430
bra-r.6	103855431	uncharacterized LOC103855431
vvi-u.5	104880162	uncharacterized LOC104880162
ghi-r.1	107890969	uncharacterized LOC107890969
ghi-r.1	107941697	uncharacterized LOC107941697
ghi-r.1	107898351	uncharacterized LOC107898351
bna-r.1	106427380	uncharacterized LOC106427380
bna-r.1	106433825	uncharacterized LOC106433825
cit-r.1	102625633	hypothetical protein
sly-u.5	101251213	starch-binding domain-containing protein
sot-r.1	102586811	uncharacterized LOC102586811
nta-r.1	107831726	uncharacterized LOC107831726
nta-r.1	107801903	uncharacterized LOC107801903
osa-u.5	4338946	uncharacterized LOC4338946
osa-u.5	4324752	uncharacterized LOC4324752
zma-u.5	100279613	uncharacterized LOC100279613
zma-u.5	100285836	uncharacterized LOC100285836
tae-r.2	123062649	uncharacterized LOC123062649
tae-r.2	123058188	uncharacterized LOC123058188
tae-r.2	123071471	uncharacterized LOC123071471
hvu-r.1	123440513	uncharacterized LOC123440513
hvu-r.1	123445998	uncharacterized LOC123445998
sbi-r.1	8060120	uncharacterized LOC8060120
sbi-r.1	8061740	uncharacterized LOC8061740
bdi-r.1	100835703	cyclomaltodextrin glucanotransferase
bdi-r.1	100844062	uncharacterized LOC100844062
cre-r.1	CHLRE_09g415600v5	uncharacterized protein
cre-r.1	CHLRE_06g269601v5	uncharacterized protein
cre-r.1	CHLRE_06g269650v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(5894 genes)

IEA

GO MF

GO:2001070 [list] [network] starch binding

(30 genes)

IEA

Protein

XP_040870345.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 2, cyto 1, plas 1, cyto_plas 1

(predict for XP_040870345.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_040870345.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100780774	gma-u.5 for 100784126	mtr-u.5 for 11422472	ppo-u.5 for 7487312	ppo-u.5 for 7487467	ath-u.5 for AT5G01260	bra-r.6 for 117132430	bra-r.6 for 103855431	vvi-u.5 for 104880162	ghi-r.1 for 107890969	ghi-r.1 for 107941697	ghi-r.1 for 107898351	bna-r.1 for 106427380	bna-r.1 for 106433825	cit-r.1 for 102625633	sly-u.5 for 101251213	sot-r.1 for 102586811	nta-r.1 for 107831726	nta-r.1 for 107801903	osa-u.5 for 4338946	osa-u.5 for 4324752	zma-u.5 for 100279613	zma-u.5 for 100285836	tae-r.2 for 123062649	tae-r.2 for 123058188	tae-r.2 for 123071471	hvu-r.1 for 123440513	hvu-r.1 for 123445998	sbi-r.1 for 8060120	sbi-r.1 for 8061740	bdi-r.1 for 100835703	bdi-r.1 for 100844062	cre-r.1 for CHLRE_09g415600v5	cre-r.1 for CHLRE_06g269601v5	cre-r.1 for CHLRE_06g269650v5

Ortholog

Ortholog ID: 3623

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100811273

uncharacterized LOC100817670

uncharacterized LOC11422472

uncharacterized LOC7487312

uncharacterized LOC7487467

Carbohydrate-binding-like fold

uncharacterized LOC117132430

uncharacterized LOC103855431

uncharacterized LOC104880162

uncharacterized LOC107890969

uncharacterized LOC107941697

uncharacterized LOC107889768

uncharacterized LOC106427380

uncharacterized LOC106433825

hypothetical protein

starch-binding domain-containing protein

uncharacterized LOC102586811

uncharacterized LOC107831726

uncharacterized LOC107801903

uncharacterized LOC4338946

uncharacterized LOC4324752

uncharacterized LOC100279613

uncharacterized LOC100285836

uncharacterized LOC123062649

uncharacterized LOC123058188

uncharacterized LOC123182195

uncharacterized LOC123440513

uncharacterized LOC123445998

uncharacterized LOC8060120

uncharacterized LOC8061740

cyclomaltodextrin glucanotransferase

uncharacterized LOC100844062

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	3
ath00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bra00350	Tyrosine metabolism	2
bra00360	Phenylalanine metabolism	2
bra01240	Biosynthesis of cofactors	2
bra04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2
cit00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	5
osa04141	Protein processing in endoplasmic reticulum	4
osa03040	Spliceosome	4
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	8
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	3
hvu03020	RNA polymerase	2
hvu03410	Base excision repair	2
hvu03030	DNA replication	2
hvu03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	4
bdi00620	Pyruvate metabolism	3
bdi00071	Fatty acid degradation	2
bdi00350	Tyrosine metabolism	2
bdi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100811273

100817670

11422472

7487312

7487467

831794

117132430

103855431

104880162

107890969

107941697

107889768

106427380

106433825

102625633

101251213

102586811

107831726

107801903

4338946

4324752

100279613

100285836

123062649

123058188

123182195

123440513

123445998

8060120

8061740

100835703

100844062

5722366

5721869

5721868

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100780774 (gma-u.5 coexpression data)

Top 50 enrichment test to 100780774 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	2	1	2	1	3	2	1	1	1	2	2	2	3	2	2	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100780774 (gma-u.5 coexpression data)

Top 50 enrichment test to 100780774 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**