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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g415600v5   uncharacterized protein 
 cre-r.1   CHLRE_06g269601v5   uncharacterized protein 
 cre-r.1   CHLRE_06g269650v5   uncharacterized protein 
 ath-u.5   AT5G01260   Carbohydrate-binding-like fold 
 gma-u.5   100780774   uncharacterized LOC100780774 
 sly-u.5   101251213   starch-binding domain-containing protein 
 osa-u.5   4338946   uncharacterized LOC4338946 
 osa-u.5   4324752   uncharacterized LOC4324752 
 zma-u.5   100285836   uncharacterized LOC100285836 
 zma-u.5   100279613   uncharacterized LOC100279613 
 bra-r.6   117132430   uncharacterized LOC117132430 
 bra-r.6   103855431   uncharacterized LOC103855431 
 vvi-u.5   104880162   uncharacterized LOC104880162 
 ppo-u.5   7487312   uncharacterized LOC7487312 
 ppo-u.5   7487467   uncharacterized LOC7487467 
 mtr-u.5   11422472   uncharacterized LOC11422472 
 tae-r.2   123071471   uncharacterized LOC123071471 
 tae-r.2   123079806   uncharacterized LOC123079806 
 tae-r.2   123135181   uncharacterized LOC123135181 
 hvu-r.1   123445998   uncharacterized LOC123445998 
 hvu-r.1   123440513   uncharacterized LOC123440513 
 ghi-r.1   107941697   uncharacterized LOC107941697 
 ghi-r.1   107890969   uncharacterized LOC107890969 
 ghi-r.1   107889768   uncharacterized LOC107889768 
 bna-r.1   106427380   uncharacterized LOC106427380 
 bna-r.1   106433825   uncharacterized LOC106433825 
 sbi-r.1   8061740   uncharacterized LOC8061740 
 sbi-r.1   8060120   uncharacterized LOC8060120 
 sot-r.1   102586811   uncharacterized LOC102586811 
 cit-r.1   102625633   hypothetical protein 
 bdi-r.1   100844062   uncharacterized LOC100844062 
 bdi-r.1   100835703   cyclomaltodextrin glucanotransferase 
 nta-r.1   107801903   uncharacterized LOC107801903 
 nta-r.1   107831726   uncharacterized LOC107831726 

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Top 50 coexpressed genes to CHLRE_09g415600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g415600v5 (cre-r.1 coexpression data)

CoexMap"5722366"


creCHLRE_09g415600v5 | Entrez gene ID : 5722366      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 3 1 1 1 2 2 2 1 2 1 3 2 3 2 2 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
GO:2001070 [list] [network] starch binding  (26 genes)  IEA  
Protein XP_042921668.1 [sequence] [blastp]
XP_042921669.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_042921668.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_042921669.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_042921668.1)
chlo 7  (predict for XP_042921669.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g415600v5
cre-r.1
for
CHLRE_06g269601v5
cre-r.1
for
CHLRE_06g269650v5
ath-u.5
for
AT5G01260
gma-u.5
for
100780774
sly-u.5
for
101251213
osa-u.5
for
4338946
osa-u.5
for
4324752
zma-u.5
for
100285836
zma-u.5
for
100279613
bra-r.6
for
117132430
bra-r.6
for
103855431
vvi-u.5
for
104880162
ppo-u.5
for
7487312
ppo-u.5
for
7487467
mtr-u.5
for
11422472
tae-r.2
for
123071471
tae-r.2
for
123079806
tae-r.2
for
123135181
hvu-r.1
for
123445998
hvu-r.1
for
123440513
ghi-r.1
for
107941697
ghi-r.1
for
107890969
ghi-r.1
for
107889768
bna-r.1
for
106427380
bna-r.1
for
106433825
sbi-r.1
for
8061740
sbi-r.1
for
8060120
sot-r.1
for
102586811
cit-r.1
for
102625633
bdi-r.1
for
100844062
bdi-r.1
for
100835703
nta-r.1
for
107801903
nta-r.1
for
107831726


Ortholog ID: 3623
Species cre cre cre ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae tae hvu hvu ghi ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol CHLRE_09g415600v5 CHLRE_06g269601v5 CHLRE_06g269650v5 AT5G01260 LOC100811273 LOC100817670 LOC101251213 LOC4338946 LOC4324752 LOC100285836 LOC100279613 LOC117132430 LOC103855431 LOC104880162 LOC7487312 LOC7487467 LOC11422472 LOC123182195 LOC123062649 LOC123058188 LOC123445998 LOC123440513 LOC107941697 LOC107890969 LOC107889768 LOC106427380 LOC106433825 LOC8061740 LOC8060120 LOC102586811 LOC102625633 LOC100844062 LOC100835703 LOC107801903 LOC107831726
Function* uncharacterized protein uncharacterized protein uncharacterized protein Carbohydrate-binding-like fold uncharacterized LOC100811273 uncharacterized LOC100817670 starch-binding domain-containing protein uncharacterized LOC4338946 uncharacterized LOC4324752 uncharacterized LOC100285836 uncharacterized LOC100279613 uncharacterized LOC117132430 uncharacterized LOC103855431 uncharacterized LOC104880162 uncharacterized LOC7487312 uncharacterized LOC7487467 uncharacterized LOC11422472 uncharacterized LOC123182195 uncharacterized LOC123062649 uncharacterized LOC123058188 uncharacterized LOC123445998 uncharacterized LOC123440513 uncharacterized LOC107941697 uncharacterized LOC107890969 uncharacterized LOC107889768 uncharacterized LOC106427380 uncharacterized LOC106433825 uncharacterized LOC8061740 uncharacterized LOC8060120 uncharacterized LOC102586811 hypothetical protein uncharacterized LOC100844062 cyclomaltodextrin glucanotransferase uncharacterized LOC107801903 uncharacterized LOC107831726
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 5
osa04141 Protein processing in endoplasmic reticulum 4
osa03040 Spliceosome 4
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
bra01240 Biosynthesis of cofactors 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03020 RNA polymerase 2
hvu03410 Base excision repair 2
hvu03030 DNA replication 2
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 4
bdi00620 Pyruvate metabolism 3
bdi00071 Fatty acid degradation 2
bdi00350 Tyrosine metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5722366 5721869 5721868 831794 100811273 100817670 101251213 4338946 4324752 100285836 100279613 117132430 103855431 104880162 7487312 7487467 11422472 123182195 123062649 123058188 123445998 123440513 107941697 107890969 107889768 106427380 106433825 8061740 8060120 102586811 102625633 100844062 100835703 107801903 107831726
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