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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121202870   protein FAR1-RELATED SEQUENCE 6 
 ghi-r.1   107891670   protein FAR1-RELATED SEQUENCE 8 
 ghi-r.1   107897279   protein FAR1-RELATED SEQUENCE 6 
 ghi-r.1   107906450   protein FAR1-RELATED SEQUENCE 6 
 ath-u.5   FRS6   FAR1-related sequence 6 
 ath-u.5   FRS8   FAR1-related sequence 8 
 bra-r.6   103868498   protein FAR1-RELATED SEQUENCE 6 
 bra-r.6   103830414   protein FAR1-RELATED SEQUENCE 8 
 bna-r.1   106353353   protein FAR1-RELATED SEQUENCE 8-like 
 bna-r.1   125597647   protein FAR1-RELATED SEQUENCE 6-like 
 bna-r.1   106383055   protein FAR1-RELATED SEQUENCE 8-like 
 cit-r.1   102612592   protein FAR1-RELATED SEQUENCE 6-like 
 gma-u.5   100796267   protein FAR1-RELATED SEQUENCE 6 
 gma-u.5   100796448   uncharacterized LOC100796448 
 gma-u.5   100811666   protein FAR1-RELATED SEQUENCE 6 
 vvi-u.5   100249256   protein FAR1-RELATED SEQUENCE 8 
 vvi-u.5   100853055   protein FAR1-RELATED SEQUENCE 6 
 vvi-u.5   100244087   protein FAR1-RELATED SEQUENCE 6 
 ppo-u.5   18096695   protein FAR1-RELATED SEQUENCE 8 
 ppo-u.5   18094865   protein FAR1-RELATED SEQUENCE 6 
 ppo-u.5   7471602   protein FAR1-RELATED SEQUENCE 6 
 mtr-u.5   112419053   protein FAR1-RELATED SEQUENCE 8 
 sly-u.5   101268116   protein FAR1-RELATED SEQUENCE 8 
 sot-r.1   102599522   protein FAR1-RELATED SEQUENCE 6 
 sot-r.1   102600064   protein FAR1-RELATED SEQUENCE 8-like 
 sot-r.1   102584795   protein FAR1-RELATED SEQUENCE 6-like 
 nta-r.1   107819847   protein FAR1-RELATED SEQUENCE 6-like 
 nta-r.1   107807983   protein FAR1-RELATED SEQUENCE 6-like 
 nta-r.1   107807937   protein FAR1-RELATED SEQUENCE 6 
 osa-u.5   4329935   protein FAR1-RELATED SEQUENCE 6 
 zma-u.5   103627397   protein FAR1-RELATED SEQUENCE 6 
 tae-r.2   123127664   protein FAR1-RELATED SEQUENCE 6 
 tae-r.2   123137425   protein FAR1-RELATED SEQUENCE 6 
 tae-r.2   123144766   protein FAR1-RELATED SEQUENCE 6 
 hvu-r.1   123402006   protein FAR1-RELATED SEQUENCE 6-like 
 sbi-r.1   110434967   protein FAR1-RELATED SEQUENCE 6-like 
 bdi-r.1   100843796   protein FAR1-RELATED SEQUENCE 6 

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Top 50 coexpressed genes to 121202870 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121202870 (ghi-r.1 coexpression data)

CoexMap"121202870"


ghiLOC121202870 | Entrez gene ID : 121202870    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 1 3 3 3 1 1 3 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_040949603.1 [sequence] [blastp]
XP_040949604.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_040949603.1)
cyto 5,  nucl 1,  pero 1,  chlo 1,  extr 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040949604.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040949603.1)
other 9  (predict for XP_040949604.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121202870
ghi-r.1
for
107891670
ghi-r.1
for
107897279
ghi-r.1
for
107906450
ath-u.5
for
FRS6
ath-u.5
for
FRS8
bra-r.6
for
103868498
bra-r.6
for
103830414
bna-r.1
for
106353353
bna-r.1
for
125597647
bna-r.1
for
106383055
cit-r.1
for
102612592
gma-u.5
for
100796267
gma-u.5
for
100796448
gma-u.5
for
100811666
vvi-u.5
for
100249256
vvi-u.5
for
100853055
vvi-u.5
for
100244087
ppo-u.5
for
18096695
ppo-u.5
for
18094865
ppo-u.5
for
7471602
mtr-u.5
for
112419053
sly-u.5
for
101268116
sot-r.1
for
102599522
sot-r.1
for
102600064
sot-r.1
for
102584795
nta-r.1
for
107819847
nta-r.1
for
107807983
nta-r.1
for
107807937
osa-u.5
for
4329935
zma-u.5
for
103627397
tae-r.2
for
123127664
tae-r.2
for
123137425
tae-r.2
for
123144766
hvu-r.1
for
123402006
sbi-r.1
for
110434967
bdi-r.1
for
100843796


Ortholog ID: 2111
Species ghi ghi ghi ath ath bra bra bna bna bna gma gma gma vvi vvi vvi ppo ppo ppo sly sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107906450 LOC107962920 LOC121218322 FRS6 FRS8 LOC103868498 LOC103830414 LOC106353353 LOC106445721 LOC106402639 LOC100796267 LOC100796448 LOC100795194 LOC100249256 LOC100853055 LOC100244087 LOC18096695 LOC18094865 LOC18096697 LOC101268116 LOC101258545 LOC102599522 LOC102600064 LOC102583321 LOC107819847 LOC107765042 LOC107765041 LOC4329935 LOC103627397 LOC123127664 LOC123137425 LOC123144766 LOC123402006 LOC110434967 LOC100843796
Function* protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 FAR1-related sequence 6 FAR1-related sequence 8 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 8 protein FAR1-RELATED SEQUENCE 8-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6 uncharacterized LOC100796448 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 8 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 8 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 8 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 8-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 8 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906450 107962920 121218322 841683 844341 103868498 103830414 106353353 106445721 106402639 100796267 100796448 100795194 100249256 100853055 100244087 18096695 18094865 18096697 101268116 101258545 102599522 102600064 102583321 107819847 107765042 107765041 4329935 103627397 123127664 123137425 123144766 123402006 110434967 100843796
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