ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	121203450	uncharacterized LOC121203450
ghi-r.1	107947761	uncharacterized LOC107947761
ghi-r.1	107946733	uncharacterized LOC107946733
ghi-r.1	107933686	uncharacterized LOC107933686
ath-u.5	AT2G35360	ubiquitin family protein
bra-r.6	103867371	uncharacterized LOC103867371
bna-r.1	111205064	uncharacterized LOC111205064
bna-r.1	125575056	uncharacterized LOC125575056
bna-r.1	125600507	uncharacterized LOC125600507
cit-r.1	102614653	uncharacterized LOC102614653
gma-u.5	100793775	SAYSvFN domain-containing protein
gma-u.5	100499994	uncharacterized LOC100499994
vvi-u.5	100254109	uncharacterized LOC100254109
ppo-u.5	18096947	uncharacterized LOC18096947
mtr-u.5	11426210	uncharacterized LOC11426210
sly-u.5	101256899	uncharacterized LOC101256899
sot-r.1	102599121	uncharacterized LOC102599121
nta-r.1	107820170	uncharacterized LOC107820170
nta-r.1	107767687	uncharacterized LOC107767687
osa-u.5	4347931	uncharacterized LOC4347931
zma-u.5	103632345	ubiquitin family protein
tae-r.2	123103749	uncharacterized LOC123103749
tae-r.2	123111965	uncharacterized LOC123111965
tae-r.2	123121533	uncharacterized LOC123121533
hvu-r.1	123397227	uncharacterized LOC123397227
sbi-r.1	8062598	uncharacterized LOC8062598
bdi-r.1	100832192	uncharacterized LOC100832192
cre-r.1	CHLRE_12g533400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_040939324.1 [sequence] [blastp]
XP_040939325.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, cyto_E.R. 4, E.R. 2, mito 1, extr 1, pero 1, cysk 1, golg 1	(predict for XP_040939324.1)
cyto 4, cyto_E.R. 4, E.R. 1, mito 1, extr 1, pero 1, cysk 1, golg 1	(predict for XP_040939325.1)

Subcellular
localization
TargetP

other 8, chlo 3	(predict for XP_040939324.1)
other 8, chlo 3	(predict for XP_040939325.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121203450	ghi-r.1 for 107947761	ghi-r.1 for 107946733	ghi-r.1 for 107933686	ath-u.5 for AT2G35360	bra-r.6 for 103867371	bna-r.1 for 111205064	bna-r.1 for 125575056	bna-r.1 for 125600507	cit-r.1 for 102614653	gma-u.5 for 100793775	gma-u.5 for 100499994	vvi-u.5 for 100254109	ppo-u.5 for 18096947	mtr-u.5 for 11426210	sly-u.5 for 101256899	sot-r.1 for 102599121	nta-r.1 for 107820170	nta-r.1 for 107767687	osa-u.5 for 4347931	zma-u.5 for 103632345	tae-r.2 for 123103749	tae-r.2 for 123111965	tae-r.2 for 123121533	hvu-r.1 for 123397227	sbi-r.1 for 8062598	bdi-r.1 for 100832192	cre-r.1 for CHLRE_12g533400v5

Ortholog

Ortholog ID: 7175

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107918087

uncharacterized LOC121223356

uncharacterized protein At3g27210

ubiquitin family protein

uncharacterized LOC103867371

uncharacterized LOC111205064

uncharacterized LOC125575056

uncharacterized LOC125600507

uncharacterized LOC102614653

SAYSvFN domain-containing protein

uncharacterized LOC100499994

uncharacterized LOC100254109

uncharacterized LOC18096947

uncharacterized LOC11426210

uncharacterized LOC101256899

uncharacterized LOC102599121

uncharacterized LOC107820170

uncharacterized LOC107767687

uncharacterized LOC4347931

ubiquitin family protein

uncharacterized LOC123103749

uncharacterized LOC123111965

uncharacterized LOC123121533

uncharacterized LOC123397227

uncharacterized LOC8062598

uncharacterized LOC100832192

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03250	Viral life cycle - HIV-1	2
bra03040	Spliceosome	2
bra03015	mRNA surveillance pathway	2
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	9
cit03018	RNA degradation	2
cit03040	Spliceosome	2
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	5
nta00040	Pentose and glucuronate interconversions	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2
nta00040	Pentose and glucuronate interconversions	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00510	N-Glycan biosynthesis	3
osa00513	Various types of N-glycan biosynthesis	3
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	4
bdi04145	Phagosome	4
bdi04148	Efferocytosis	4
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

107918087

121223356

107960101

818103

103867371

111205064

125575056

125600507

102614653

100793775

100499994

100254109

18096947

11426210

101256899

102599121

107820170

107767687

4347931

103632345

123103749

123111965

123121533

123397227

8062598

100832192

66055659

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 121203450 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121203450 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	3	1	2	1	1	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121203450 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121203450 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**