ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121208200	signal peptidase complex catalytic subunit SEC11A
ghi-r.1	107906485	signal peptidase complex catalytic subunit SEC11A
ghi-r.1	107940961	signal peptidase complex catalytic subunit SEC11A
ghi-r.1	107914166	signal peptidase complex catalytic subunit SEC11A
ath-u.5	AT3G15710	Peptidase S24/S26A/S26B/S26C family protein
ath-u.5	AT1G52600	Peptidase S24/S26A/S26B/S26C family protein
bra-r.6	103840539	signal peptidase complex catalytic subunit SEC11A
bra-r.6	103848737	signal peptidase complex catalytic subunit SEC11C
bra-r.6	103868489	signal peptidase complex catalytic subunit SEC11C
bna-r.1	106447414	signal peptidase complex catalytic subunit SEC11C-like
bna-r.1	106449390	signal peptidase complex catalytic subunit SEC11C
bna-r.1	125598503	signal peptidase complex catalytic subunit SEC11C-like
cit-r.1	102625344	uncharacterized LOC102625344
cit-r.1	102629125	uncharacterized LOC102629125
gma-u.5	100807064	signal peptidase complex catalytic subunit SEC11C-like
gma-u.5	100797511	signal peptidase complex catalytic subunit SEC11C-like
gma-u.5	100797179	signal peptidase complex catalytic subunit SEC11A
vvi-u.5	100257568	uncharacterized LOC100257568
vvi-u.5	100257730	uncharacterized LOC100257730
ppo-u.5	7478360	uncharacterized LOC7478360
ppo-u.5	7478113	uncharacterized LOC7478113
mtr-u.5	120578205	signal peptidase complex catalytic subunit SEC11A
mtr-u.5	11427205	signal peptidase complex catalytic subunit SEC11A
sly-u.5	101262891	uncharacterized LOC101262891
sot-r.1	102593227	signal peptidase complex catalytic subunit SEC11A-like
nta-r.1	107768262	uncharacterized LOC107768262
nta-r.1	107775698	uncharacterized LOC107775698
osa-u.5	4340738	uncharacterized LOC4340738
osa-u.5	4338334	uncharacterized LOC4338334
zma-u.5	100191345	uncharacterized LOC100191345
zma-u.5	103654093	signal peptidase complex catalytic subunit SEC11C
zma-u.5	100273903	uncharacterized LOC100273903
tae-r.2	123053382	signal peptidase complex catalytic subunit SEC11A
tae-r.2	123123338	signal peptidase complex catalytic subunit SEC11A
tae-r.2	123105521	signal peptidase complex catalytic subunit SEC11A
hvu-r.1	123440069	signal peptidase complex catalytic subunit SEC11A-like
hvu-r.1	123452855	signal peptidase complex catalytic subunit SEC11A-like
sbi-r.1	8073502	signal peptidase complex catalytic subunit SEC11A
sbi-r.1	8077936	signal peptidase complex catalytic subunit SEC11A
bdi-r.1	100844570	signal peptidase complex catalytic subunit SEC11A
bdi-r.1	100829703	signal peptidase complex catalytic subunit SEC11A
bdi-r.1	100821687	signal peptidase complex catalytic subunit SEC11A
cre-r.1	CHLRE_09g406800v5	uncharacterized protein

Top 50 coexpressed genes to 121208200 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121208200 (ghi-r.1 coexpression data)

CoexMap"121208200"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi03060 [list] [network] Protein export (151 genes)

GO BP

GO:0006465 [list] [network] signal peptide processing

(63 genes)

IEA

GO CC

GO:0005787 [list] [network] signal peptidase complex	(33 genes)	IEA
GO:0016020 [list] [network] membrane	(8195 genes)	IEA

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity

(287 genes)

IEA

Protein

XP_040934667.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 4, cyto 3, plas 3, cyto_plas 3

(predict for XP_040934667.1)

Subcellular
localization
TargetP

other 6

(predict for XP_040934667.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121208200	ghi-r.1 for 107906485	ghi-r.1 for 107940961	ghi-r.1 for 107914166	ath-u.5 for AT3G15710	ath-u.5 for AT1G52600	bra-r.6 for 103840539	bra-r.6 for 103848737	bra-r.6 for 103868489	bna-r.1 for 106447414	bna-r.1 for 106449390	bna-r.1 for 125598503	cit-r.1 for 102625344	cit-r.1 for 102629125	gma-u.5 for 100807064	gma-u.5 for 100797511	gma-u.5 for 100797179	vvi-u.5 for 100257568	vvi-u.5 for 100257730	ppo-u.5 for 7478360	ppo-u.5 for 7478113	mtr-u.5 for 120578205	mtr-u.5 for 11427205	sly-u.5 for 101262891	sot-r.1 for 102593227	nta-r.1 for 107768262	nta-r.1 for 107775698	osa-u.5 for 4340738	osa-u.5 for 4338334	zma-u.5 for 100191345	zma-u.5 for 103654093	zma-u.5 for 100273903	tae-r.2 for 123053382	tae-r.2 for 123123338	tae-r.2 for 123105521	hvu-r.1 for 123440069	hvu-r.1 for 123452855	sbi-r.1 for 8073502	sbi-r.1 for 8077936	bdi-r.1 for 100844570	bdi-r.1 for 100829703	bdi-r.1 for 100821687	cre-r.1 for CHLRE_09g406800v5

Ortholog

Ortholog ID: 2339

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

signal peptidase complex catalytic subunit SEC11A

Peptidase S24/S26A/S26B/S26C family protein

signal peptidase complex catalytic subunit SEC11A

signal peptidase complex catalytic subunit SEC11C

signal peptidase complex catalytic subunit SEC11C-like

signal peptidase complex catalytic subunit SEC11A

uncharacterized LOC102625344

uncharacterized LOC102629125

signal peptidase complex catalytic subunit SEC11C-like

signal peptidase complex catalytic subunit SEC11A

uncharacterized LOC100257568

uncharacterized LOC100257730

uncharacterized LOC7478360

uncharacterized LOC7478113

signal peptidase complex catalytic subunit SEC11A

uncharacterized LOC101262891

signal peptidase complex catalytic subunit SEC11A-like

uncharacterized LOC107768262

uncharacterized LOC107775698

uncharacterized LOC4340738

uncharacterized LOC4338334

uncharacterized LOC100191345

signal peptidase complex catalytic subunit SEC11C

uncharacterized LOC100273903

signal peptidase complex catalytic subunit SEC11A

signal peptidase complex catalytic subunit SEC11A-like

signal peptidase complex catalytic subunit SEC11A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi04144	Endocytosis	2
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00260	Glycine, serine and threonine metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	4
ghi00600	Sphingolipid metabolism	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	10
ath03060	Protein export	4
ath04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	5
bra04145	Phagosome	5
bra00520	Amino sugar and nucleotide sugar metabolism	4
bra01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	8
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	7
bna04120	Ubiquitin mediated proteolysis	3
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	9
cit03010	Ribosome	3
cit03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	7
gma00510	N-Glycan biosynthesis	5
gma00513	Various types of N-glycan biosynthesis	5
gma03060	Protein export	4
gma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	4
gma01200	Carbon metabolism	3
gma00190	Oxidative phosphorylation	2
gma00220	Arginine biosynthesis	2
gma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	5
gma00510	N-Glycan biosynthesis	3
gma00513	Various types of N-glycan biosynthesis	3
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	4
ppo03010	Ribosome	4
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	5
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	12
mtr03060	Protein export	7
mtr04145	Phagosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	5
mtr04141	Protein processing in endoplasmic reticulum	4
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	5
sly04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	3
sot00190	Oxidative phosphorylation	3
sot04141	Protein processing in endoplasmic reticulum	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	5
nta03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	6
osa04141	Protein processing in endoplasmic reticulum	4
osa00510	N-Glycan biosynthesis	2
osa00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03060	Protein export	5
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	7
zma03060	Protein export	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	13
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	13
tae04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	12
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	7
hvu03060	Protein export	6
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2
hvu03050	Proteasome	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	4
sbi00280	Valine, leucine and isoleucine degradation	2
sbi01200	Carbon metabolism	2
sbi00190	Oxidative phosphorylation	2
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi03060	Protein export	5
sbi04145	Phagosome	3
sbi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	7
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03040	Spliceosome	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	5
bdi04141	Protein processing in endoplasmic reticulum	3
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03060	Protein export	4

Expression

Expression pattern

Entrez Gene ID^*

121208200

107906485

107940961

820814

841692

103840539

103848737

103868489

125598503

106387495

102625344

102629125

100807064

100797511

100797179

100257568

100257730

7478360

7478113

120578205

11427205

101262891

102593227

107768262

107775698

4340738

4338334

100191345

103654093

100273903

123053382

123130452

123181832

123440069

123452855

8073502

8077936

100844570

100829703

100821687

5723226

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Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	2	3	2	2	2	1	1	2	2	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121208200 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121208200 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**