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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121209370   F-box protein At5g07610 
 ghi-r.1   107893777   F-box protein At5g07610 
 ghi-r.1   107903854   F-box protein At5g07610 
 ath-u.5   AT5G07610   F-box family protein 
 bra-r.6   103855738   F-box protein At5g07610 
 bna-r.1   106429652   F-box protein At5g07610 
 cit-r.1   107178583   F-box protein At5g07610-like 
 vvi-u.5   100248929   F-box protein At5g07610 
 ppo-u.5   18098874   F-box protein At5g07610 
 sly-u.5   101258873   F-box protein At5g07610-like 
 sot-r.1   107062153   F-box protein At5g07610-like 
 sot-r.1   107059557   F-box protein At5g07610-like 
 nta-r.1   142164200   F-box protein At5g07610-like 
 nta-r.1   142168026   F-box protein At5g07610-like 

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Top 50 coexpressed genes to 121209370 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121209370 (ghi-r.1 coexpression data)

CoexMap"121209370"


ghiLOC121209370 | Entrez gene ID : 121209370    
Species ghi ath bra bna cit vvi ppo sly sot nta gma zma cre sbi tae mtr osa hvu bdi
Paralog 3 1 1 1 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040935912.1 [sequence] [blastp]
XP_040935913.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  chlo 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040935912.1)
cyto 6,  nucl 1,  mito 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040935913.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_040935912.1)
other 8,  chlo 5  (predict for XP_040935913.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121209370
ghi-r.1
for
107893777
ghi-r.1
for
107903854
ath-u.5
for
AT5G07610
bra-r.6
for
103855738
bna-r.1
for
106429652
cit-r.1
for
107178583
vvi-u.5
for
100248929
ppo-u.5
for
18098874
sly-u.5
for
101258873
sot-r.1
for
107062153
sot-r.1
for
107059557
nta-r.1
for
142164200
nta-r.1
for
142168026


Ortholog ID: 1765
Species ghi ghi ghi ath bra bna cit cit vvi ppo ppo sly sot sot nta nta nta
Symbol LOC121209370 LOC107893777 LOC107890964 AT5G07610 LOC103855738 LOC106429652 LOC107178583 LOC107178590 LOC100248929 LOC7482393 LOC7482381 LOC101264199 LOC107059557 LOC107063091 LOC107800358 LOC107805722 LOC107779620
Function* F-box protein At5g07610 F-box protein At5g07610 F-box protein At5g07610 F-box family protein F-box protein At5g07610 F-box protein At5g07610 F-box protein At5g07610-like F-box protein At5g07610-like F-box protein At5g07610 F-box protein At5g07610 F-box protein At5g07610 F-box protein At5g07610 F-box protein At5g07610-like F-box protein At5g07610-like F-box protein At5g07610-like F-box protein At5g07610-like F-box protein At5g07610-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 2
bna00561 Glycerolipid metabolism 2
bna00600 Sphingolipid metabolism 2
bna00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
sly00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121209370 107893777 107890964 830654 103855738 106429652 107178583 107178590 100248929 7482393 7482381 101264199 107059557 107063091 107800358 107805722 107779620
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