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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121211285   30S ribosomal protein S11, chloroplastic 
 ghi-r.1   121228994   30S ribosomal protein S11, chloroplastic 
 ath-u.5   rps11   ribosomal protein S11 
 bna-r.1   rps11   ribosomal protein S11 
 bna-r.1   125598858   30S ribosomal protein S11, chloroplastic 
 bna-r.1   125594380   30S ribosomal protein S11, chloroplastic 
 cit-r.1   rps11   ribosomal protein S11 
 gma-u.5   rps11   30S ribosomal protein S11 
 vvi-u.5   rps11   ribosomal protein S11 
 vvi-u.5   rps11   30S ribosomal protein S11 
 ppo-u.5   rps11   ribosomal protein S11 
 mtr-u.5   120579725   30S ribosomal protein S11, chloroplastic 
 mtr-u.5   120580088   30S ribosomal protein S11, chloroplastic 
 mtr-u.5   120580181   30S ribosomal protein S11, chloroplastic 
 sly-u.5   rps11   ribosomal protein S11 
 sot-r.1   rps11   ribosomal protein S11 
 nta-r.1   rps11   30S ribosomal protein S11 
 osa-u.5   rps11   ribosomal protein S11 
 zma-u.5   rps11   ribosomal protein S11 
 sbi-r.1   rps11   ribosomal protein S11 
 bdi-r.1   rps11   ribosomal protein S11 

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Top 50 coexpressed genes to 121211285 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121211285 (ghi-r.1 coexpression data)

CoexMap"121211285"


ghiLOC121211285 | Entrez gene ID : 121211285    
Species ghi ath bna cit gma vvi ppo mtr sly sot nta osa zma sbi bdi bra cre tae hvu
Paralog 2 1 3 1 1 2 1 3 1 1 1 1 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040939858.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1  (predict for XP_040939858.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_040939858.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121211285
ghi-r.1
for
121228994
ath-u.5
for
rps11
bna-r.1
for
rps11
bna-r.1
for
125598858
bna-r.1
for
125594380
cit-r.1
for
rps11
gma-u.5
for
rps11
vvi-u.5
for
rps11
vvi-u.5
for
rps11
ppo-u.5
for
rps11
mtr-u.5
for
120579725
mtr-u.5
for
120580088
mtr-u.5
for
120580181
sly-u.5
for
rps11
sot-r.1
for
rps11
nta-r.1
for
rps11
osa-u.5
for
rps11
zma-u.5
for
rps11
sbi-r.1
for
rps11
bdi-r.1
for
rps11


Ortholog ID: 5918
Species ath bna bna bna cit gma vvi vvi ppo mtr mtr mtr sly sot nta osa zma sbi bdi
Symbol rps11 rps11 LOC125598858 LOC125594380 rps11 rps11 rps11 rps11 rps11 LOC120579725 LOC120580181 rps11 rps11 rps11 rps11 rps11 rps11 rps11 rps11
Function* ribosomal protein S11 ribosomal protein S11 30S ribosomal protein S11, chloroplastic 30S ribosomal protein S11, chloroplastic ribosomal protein S11 30S ribosomal protein S11 ribosomal protein S11 30S ribosomal protein S11 ribosomal protein S11 30S ribosomal protein S11, chloroplastic 30S ribosomal protein S11, chloroplastic ribosomal protein S11 ribosomal protein S11 ribosomal protein S11 30S ribosomal protein S11 ribosomal protein S11 ribosomal protein S11 ribosomal protein S11 ribosomal protein S11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00190 Oxidative phosphorylation 3
cit00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00190 Oxidative phosphorylation 5
gma03020 RNA polymerase 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo00190 Oxidative phosphorylation 3
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 6
nta03010 Ribosome 6
nta01200 Carbon metabolism 2
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma00195 Photosynthesis 4
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844726 11542008 125598858 125594380 4271185 3989330 7498608 4025132 4929706 120579725 120580181 5333158 3950413 4099877 800448 3131435 845228 4549224 6439841
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