ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121213722	probable acylpyruvase FAHD1, mitochondrial
ghi-r.1	107936139	probable acylpyruvase FAHD1, mitochondrial
ath-u.5	AT3G16700	Fumarylacetoacetate (FAA) hydrolase family
ath-u.5	AT4G15940	Fumarylacetoacetate (FAA) hydrolase family
bra-r.6	103833536	probable acylpyruvase FAHD1, mitochondrial
bra-r.6	103833534	probable acylpyruvase FAHD1, mitochondrial
bra-r.6	103839873	probable acylpyruvase FAHD2, mitochondrial
bna-r.1	106360642	probable acylpyruvase FAHD1, mitochondrial
bna-r.1	106416173	probable acylpyruvase FAHD1, mitochondrial
bna-r.1	106419012	probable acylpyruvase FAHD2, mitochondrial
cit-r.1	102606702	probable acylpyruvase FAHD1, mitochondrial
gma-u.5	100782718	probable acylpyruvase FAHD1, mitochondrial
gma-u.5	100775700	probable acylpyruvase FAHD1, mitochondrial
vvi-u.5	100251672	probable acylpyruvase FAHD1, mitochondrial
ppo-u.5	7496679	probable acylpyruvase FAHD1, mitochondrial
mtr-u.5	25494078	probable acylpyruvase FAHD1, mitochondrial
sly-u.5	101258990	oxaloacetate tautomerase FAHD1, mitochondrial
sot-r.1	102590064	acylpyruvase FAHD1, mitochondrial
nta-r.1	107812056	oxaloacetate tautomerase FAHD1, mitochondrial
nta-r.1	107804611	oxaloacetate tautomerase FAHD1, mitochondrial-like
osa-u.5	4334655	probable acylpyruvase FAHD2, mitochondrial
zma-u.5	100283765	uncharacterized LOC100283765
zma-u.5	100272625	uncharacterized LOC100272625
tae-r.2	123096134	probable acylpyruvase FAHD2, mitochondrial
tae-r.2	123123589	probable acylpyruvase FAHD2, mitochondrial
tae-r.2	123087826	probable acylpyruvase FAHD2, mitochondrial
hvu-r.1	123447784	probable acylpyruvase FAHD2, mitochondrial
hvu-r.1	123453155	probable acylpyruvase FAHD2, mitochondrial
sbi-r.1	8054147	acylpyruvase FAHD1, mitochondrial
sbi-r.1	8079678	acylpyruvase FAHD1, mitochondrial
bdi-r.1	100837153	probable acylpyruvase FAHD2, mitochondrial
bdi-r.1	100832416	probable acylpyruvase FAHD2, mitochondrial
cre-r.1	CHLRE_12g549450v5	uncharacterized protein

Top 50 coexpressed genes to 121213722 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121213722 (ghi-r.1 coexpression data)

CoexMap"121213722"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00350 [list] [network] Tyrosine metabolism (108 genes)

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(1525 genes)

IEA

GO MF

GO:0018773 [list] [network] acetylpyruvate hydrolase activity

(2 genes)

IEA

Protein

XP_040942656.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, pero 1, chlo_mito 1

(predict for XP_040942656.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_040942656.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121213722	ghi-r.1 for 107936139	ath-u.5 for AT3G16700	ath-u.5 for AT4G15940	bra-r.6 for 103833536	bra-r.6 for 103833534	bra-r.6 for 103839873	bna-r.1 for 106360642	bna-r.1 for 106416173	bna-r.1 for 106419012	cit-r.1 for 102606702	gma-u.5 for 100782718	gma-u.5 for 100775700	vvi-u.5 for 100251672	ppo-u.5 for 7496679	mtr-u.5 for 25494078	sly-u.5 for 101258990	sot-r.1 for 102590064	nta-r.1 for 107812056	nta-r.1 for 107804611	osa-u.5 for 4334655	zma-u.5 for 100283765	zma-u.5 for 100272625	tae-r.2 for 123096134	tae-r.2 for 123123589	tae-r.2 for 123087826	hvu-r.1 for 123447784	hvu-r.1 for 123453155	sbi-r.1 for 8054147	sbi-r.1 for 8079678	bdi-r.1 for 100837153	bdi-r.1 for 100832416	cre-r.1 for CHLRE_12g549450v5

Ortholog

Ortholog ID: 5300

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

probable acylpyruvase FAHD1, mitochondrial

Fumarylacetoacetate (FAA) hydrolase family

probable acylpyruvase FAHD1, mitochondrial

probable acylpyruvase FAHD2, mitochondrial

probable acylpyruvase FAHD1, mitochondrial

oxaloacetate tautomerase FAHD1, mitochondrial

acylpyruvase FAHD1, mitochondrial

oxaloacetate tautomerase FAHD1, mitochondrial

oxaloacetate tautomerase FAHD1, mitochondrial-like

probable acylpyruvase FAHD2, mitochondrial

uncharacterized LOC100283765

uncharacterized LOC100272625

probable acylpyruvase FAHD2, mitochondrial

acylpyruvase FAHD1, mitochondrial

probable acylpyruvase FAHD2, mitochondrial

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00020	Citrate cycle (TCA cycle)	7
ath01200	Carbon metabolism	7
ath01210	2-Oxocarboxylic acid metabolism	7
ath01230	Biosynthesis of amino acids	4
ath00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	4
bra00020	Citrate cycle (TCA cycle)	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00020	Citrate cycle (TCA cycle)	4
bna00620	Pyruvate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00020	Citrate cycle (TCA cycle)	4
bna00620	Pyruvate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00020	Citrate cycle (TCA cycle)	4
bna00620	Pyruvate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit00350	Tyrosine metabolism	2
cit00190	Oxidative phosphorylation	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	4
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	2
mtr01200	Carbon metabolism	2
mtr01210	2-Oxocarboxylic acid metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	6
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	5
sot01210	2-Oxocarboxylic acid metabolism	4
sot01230	Biosynthesis of amino acids	3
sot00190	Oxidative phosphorylation	3
sot00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta00270	Cysteine and methionine metabolism	2
nta00920	Sulfur metabolism	2
nta04122	Sulfur relay system	2
nta03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta03050	Proteasome	2
nta00270	Cysteine and methionine metabolism	2
nta00280	Valine, leucine and isoleucine degradation	2
nta00290	Valine, leucine and isoleucine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	7
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	4
zma01200	Carbon metabolism	4
zma00710	Carbon fixation by Calvin cycle	3
zma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	7
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00350	Tyrosine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00350	Tyrosine metabolism	3
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	4
sbi04120	Ubiquitin mediated proteolysis	4
sbi04141	Protein processing in endoplasmic reticulum	4
sbi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00350	Tyrosine metabolism	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7
bdi04145	Phagosome	4
bdi00230	Purine metabolism	2
bdi00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	6
bdi00350	Tyrosine metabolism	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

121213722

107936139

820922

827276

103833536

103833534

103839873

106360642

106416173

106359591

102606702

100782718

100775700

100251672

7496679

25494078

101258990

102590064

107812056

107804611

4334655

100283765

100272625

123096134

123123589

123114099

123447784

123453155

8054147

8079678

100837153

100832416

5719642

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	3	3	1	2	1	1	1	1	1	2	1	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121213722 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121213722 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**