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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121214892   DELLA protein RGA2 
 ghi-r.1   107902745   uncharacterized LOC107902745 
 ghi-r.1   107939729   uncharacterized LOC107939729 
 ghi-r.1   107943687   zinc finger BED domain-containing protein RICESLEEPER 1 

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Top 50 coexpressed genes to 121214892 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121214892 (ghi-r.1 coexpression data)

CoexMap"121214892"


ghiLOC121214892 | Entrez gene ID : 121214892    
Species ghi gma zma sbi sly cit ath nta tae mtr osa hvu bna bdi vvi bra sot cre ppo
Paralog 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway  (13 genes)  IEA  
GO:0010187 [list] [network] negative regulation of seed germination  (13 genes)  IEA  
GO:0042538 [list] [network] hyperosmotic salinity response  (13 genes)  IEA  
GO:2000033 [list] [network] regulation of seed dormancy process  (13 genes)  IEA  
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process  (18 genes)  IEA  
GO:0009867 [list] [network] jasmonic acid mediated signaling pathway  (19 genes)  IEA  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (26 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (186 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (233 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_040945324.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_040945324.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040945324.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121214892
ghi-r.1
for
107902745
ghi-r.1
for
107939729
ghi-r.1
for
107943687


Ortholog ID: 6780
Species ghi ghi
Symbol LOC107943687 LOC107943691
Function* zinc finger BED domain-containing protein RICESLEEPER 1 uncharacterized LOC107943691
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern
Entrez Gene ID* 107943687 107943691
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