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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  121217027  pentatricopeptide repeat-containing protein At5g48910 
 ghi-r.1  107931186  pentatricopeptide repeat-containing protein At5g48910 
 cit-r.1  102619201  pentatricopeptide repeat-containing protein At5g66520-like 
 vvi-u.5  100263516  pentatricopeptide repeat-containing protein At5g66520 
 ppo-u.5  7485121  pentatricopeptide repeat-containing protein At5g66520 
 sly-u.5  101262539  pentatricopeptide repeat-containing protein At5g66520-like 
 sot-r.1  107060345  pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1  107781566  pentatricopeptide repeat-containing protein At4g21065-like 
 nta-r.1  107798413  pentatricopeptide repeat-containing protein At5g66520-like 

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Top 50 coexpressed genes to 121217027 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121217027 (ghi-r.1 coexpression data)

CoexMap"121217027"


ghiLOC121217027 | Entrez gene ID : 121217027
Species ghi cit vvi ppo sly sot nta bdi osa tae bna zma cre mtr sbi gma bra ath hvu
Paralog 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040948506.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_040948506.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_040948506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
121217027


ghi-r.1
for
107931186


cit-r.1
for
102619201


vvi-u.5
for
100263516


ppo-u.5
for
7485121


sly-u.5
for
101262539


sot-r.1
for
107060345


nta-r.1
for
107781566


nta-r.1
for
107798413



Ortholog ID: 16435
Species ghi ghi cit vvi ppo sly sot nta nta
Symbol LOC121217027 LOC107931186 LOC102619201 LOC100263516 LOC7485121 LOC101262539 LOC107060345 LOC107781566 LOC107798413
Function* pentatricopeptide repeat-containing protein At5g48910 pentatricopeptide repeat-containing protein At5g48910 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g66520-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121217027 107931186 102619201 100263516 7485121 101262539 107060345 107781566 107798413
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