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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121217927   U-box domain-containing protein 11 
 ghi-r.1   107915156   U-box domain-containing protein 4 
 ghi-r.1   107904808   U-box domain-containing protein 11 
 bra-r.6   103871575   U-box domain-containing protein 4 
 bna-r.1   106415516   U-box domain-containing protein 4 
 bna-r.1   106346345   U-box domain-containing protein 4-like 
 cit-r.1   102612173   U-box domain-containing protein 4 
 gma-u.5   100819160   U-box domain-containing protein 11 
 gma-u.5   100803111   protein spotted leaf 11 
 gma-u.5   100787115   U-box domain-containing protein 11 
 vvi-u.5   100249738   U-box domain-containing protein 11 
 ppo-u.5   7486996   protein spotted leaf 11 
 ppo-u.5   7460245   U-box domain-containing protein 2 
 mtr-u.5   11444568   U-box domain-containing protein 1 
 sly-u.5   101267269   U-box domain-containing protein 4 
 sot-r.1   102583726   protein spotted leaf 11 
 nta-r.1   107775514   U-box domain-containing protein 4 
 nta-r.1   107806162   U-box domain-containing protein 19-like 
 osa-u.5   9271788   U-box domain-containing protein 14 
 zma-u.5   103650716   U-box domain-containing protein 14 
 tae-r.2   123075747   protein spotted leaf 11 
 tae-r.2   123066745   protein spotted leaf 11 
 tae-r.2   123059438   protein spotted leaf 11-like 
 hvu-r.1   123441001   protein spotted leaf 11 
 sbi-r.1   8062344   U-box domain-containing protein 14 
 bdi-r.1   100825814   uncharacterized LOC100825814 

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Top 50 coexpressed genes to 121217927 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121217927 (ghi-r.1 coexpression data)

CoexMap"121217927"


ghiLOC121217927 | Entrez gene ID : 121217927    
Species ghi bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 3 1 2 1 3 1 2 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040950543.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 1,  plas 1,  nucl 1,  vacu 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_040950543.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_040950543.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121217927
ghi-r.1
for
107915156
ghi-r.1
for
107904808
bra-r.6
for
103871575
bna-r.1
for
106415516
bna-r.1
for
106346345
cit-r.1
for
102612173
gma-u.5
for
100819160
gma-u.5
for
100803111
gma-u.5
for
100787115
vvi-u.5
for
100249738
ppo-u.5
for
7486996
ppo-u.5
for
7460245
mtr-u.5
for
11444568
sly-u.5
for
101267269
sot-r.1
for
102583726
nta-r.1
for
107775514
nta-r.1
for
107806162
osa-u.5
for
9271788
zma-u.5
for
103650716
tae-r.2
for
123075747
tae-r.2
for
123066745
tae-r.2
for
123059438
hvu-r.1
for
123441001
sbi-r.1
for
8062344
bdi-r.1
for
100825814


Ortholog ID: 9204
Species ghi ghi ghi bra bna bna cit gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC121217927 LOC107915156 LOC107904808 LOC103871575 LOC106415516 LOC106346345 LOC102612173 LOC100819160 LOC100803111 LOC100787115 LOC100249738 LOC7486996 LOC7460245 LOC11444568 LOC101267269 LOC102583726 LOC107775514 LOC107806162 LOC9271788 LOC103650716 LOC123075747 LOC123066745 LOC123059438 LOC123441001 LOC8062344 LOC100825814
Function* U-box domain-containing protein 11 U-box domain-containing protein 4 U-box domain-containing protein 11 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4-like U-box domain-containing protein 4 U-box domain-containing protein 11 protein spotted leaf 11 U-box domain-containing protein 11 U-box domain-containing protein 11 protein spotted leaf 11 U-box domain-containing protein 2 U-box domain-containing protein 1 U-box domain-containing protein 4 protein spotted leaf 11 U-box domain-containing protein 4 U-box domain-containing protein 19-like U-box domain-containing protein 14 U-box domain-containing protein 14 protein spotted leaf 11 protein spotted leaf 11 protein spotted leaf 11-like protein spotted leaf 11 U-box domain-containing protein 14 uncharacterized LOC100825814
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna02010 ABC transporters 2
bna04981 Folate transport and metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna02010 ABC transporters 2
bna04981 Folate transport and metabolism 2
bna00071 Fatty acid degradation 2
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121217927 107915156 107904808 103871575 106415516 106346345 102612173 100819160 100803111 100787115 100249738 7486996 7460245 11444568 101267269 102583726 107775514 107806162 9271788 103650716 123075747 123066745 123059438 123441001 8062344 100825814
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