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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121218665   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 ghi-r.1   107960285   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 ghi-r.1   107958371   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 ghi-r.1   107956011   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 ath-u.5   FLU   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103870067   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 bra-r.6   103859554   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 bna-r.1   111215718   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 bna-r.1   106452249   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 bna-r.1   106439351   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 cit-r.1   102615843   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 gma-u.5   100782310   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 gma-u.5   100818487   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 vvi-u.5   104880199   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 ppo-u.5   18094703   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 mtr-u.5   11424348   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 sly-u.5   101263216   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 sly-u.5   101244708   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 sot-r.1   102586913   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 sot-r.1   102599200   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 nta-r.1   107812744   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 nta-r.1   107793011   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 nta-r.1   107810991   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 osa-u.5   4324026   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 osa-u.5   4329811   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 zma-u.5   100280701   FLU 
 zma-u.5   100193191   uncharacterized LOC100193191 
 tae-r.2   123111621   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 tae-r.2   123103422   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 tae-r.2   123132133   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 hvu-r.1   123396762   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 hvu-r.1   123402543   protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like 
 sbi-r.1   8064651   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 sbi-r.1   8070575   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 bdi-r.1   100846216   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 bdi-r.1   100829743   protein FLUORESCENT IN BLUE LIGHT, chloroplastic 
 cre-r.1   CHLRE_10g460050v5   uncharacterized protein 

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Top 50 coexpressed genes to 121218665 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121218665 (ghi-r.1 coexpression data)

CoexMap"121218665"


ghiLOC121218665 | Entrez gene ID : 121218665    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 1 1 1 2 2 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015995 [list] [network] chlorophyll biosynthetic process  (27 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040952183.1 [sequence] [blastp]
XP_040952184.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  plas 3,  cyto 1,  golg_plas 1,  cysk_plas 1  (predict for XP_040952183.1)
chlo 8,  mito 1  (predict for XP_040952184.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040952183.1)
scret 9  (predict for XP_040952184.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121218665
ghi-r.1
for
107960285
ghi-r.1
for
107958371
ghi-r.1
for
107956011
ath-u.5
for
FLU
bra-r.6
for
103870067
bra-r.6
for
103859554
bna-r.1
for
111215718
bna-r.1
for
106452249
bna-r.1
for
106439351
cit-r.1
for
102615843
gma-u.5
for
100782310
gma-u.5
for
100818487
vvi-u.5
for
104880199
ppo-u.5
for
18094703
mtr-u.5
for
11424348
sly-u.5
for
101263216
sly-u.5
for
101244708
sot-r.1
for
102586913
sot-r.1
for
102599200
nta-r.1
for
107812744
nta-r.1
for
107793011
nta-r.1
for
107810991
osa-u.5
for
4324026
osa-u.5
for
4329811
zma-u.5
for
100280701
zma-u.5
for
100193191
tae-r.2
for
123111621
tae-r.2
for
123103422
tae-r.2
for
123132133
hvu-r.1
for
123396762
hvu-r.1
for
123402543
sbi-r.1
for
8064651
sbi-r.1
for
8070575
bdi-r.1
for
100846216
bdi-r.1
for
100829743
cre-r.1
for
CHLRE_10g460050v5


Ortholog ID: 4231
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107958371 LOC107956011 LOC107906060 FLU LOC103870067 LOC103859554 LOC111215718 LOC106452249 LOC106389169 LOC102615843 LOC100782310 LOC100818487 LOC104880199 LOC18094703 LOC11424348 LOC101263216 LOC101244708 LOC102586913 LOC102599200 LOC107812744 LOC107793011 LOC142179378 LOC4324026 LOC4329811 LOC100280701 LOC100193191 LOC123103422 LOC123121031 LOC123136162 LOC123396762 LOC123402543 LOC8064651 LOC8070575 LOC100846216 LOC100829743 CHLRE_10g460050v5
Function* protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic FLU uncharacterized LOC100193191 protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic protein FLUORESCENT IN BLUE LIGHT, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 5
vvi01240 Biosynthesis of cofactors 5
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00860 Porphyrin metabolism 5
mtr01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03060 Protein export 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 11
cre01240 Biosynthesis of cofactors 7
cre00195 Photosynthesis 2
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958371 107956011 107906060 820628 103870067 103859554 111215718 106452249 106389169 102615843 100782310 100818487 104880199 18094703 11424348 101263216 101244708 102586913 102599200 107812744 107793011 142179378 4324026 4329811 100280701 100193191 123103422 123121031 123136162 123396762 123402543 8064651 8070575 100846216 100829743 5723957
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