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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121223296   lysine-specific demethylase JMJ706 
 ghi-r.1   107938573   lysine-specific demethylase JMJ706 
 ghi-r.1   107944818   lysine-specific demethylase JMJ706 
 ghi-r.1   107946671   lysine-specific demethylase JMJ706 
 ath-u.5   AT5G46910   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 bra-r.6   103839565   lysine-specific demethylase JMJ706 
 bra-r.6   103853751   lysine-specific demethylase JMJ706 
 bna-r.1   111202086   lysine-specific demethylase JMJ706-like 
 bna-r.1   106366838   lysine-specific demethylase JMJ706-like 
 bna-r.1   106381891   lysine-specific demethylase JMJ706 
 cit-r.1   102611554   lysine-specific demethylase JMJ13 
 gma-u.5   100798611   lysine-specific demethylase JMJ706 
 vvi-u.5   100266131   lysine-specific demethylase JMJ13 
 ppo-u.5   7456090   lysine-specific demethylase JMJ13 
 ppo-u.5   18094128   lysine-specific demethylase JMJ13 
 mtr-u.5   11433984   lysine-specific demethylase JMJ706 
 sly-u.5   101268889   lysine-specific demethylase JMJ13-like 
 sly-u.5   101251071   lysine-specific demethylase JMJ13-like 
 sot-r.1   102585838   lysine-specific demethylase JMJ706 
 nta-r.1   107760192   lysine-specific demethylase JMJ13 
 osa-u.5   4349499   lysine-specific demethylase JMJ706-like 
 osa-u.5   4330404   lysine-specific demethylase JMJ706-like 
 zma-u.5   103626296   lysine-specific demethylase JMJ706 
 zma-u.5   103637730   lysine-specific demethylase JMJ706 
 zma-u.5   100501391   uncharacterized LOC100501391 
 tae-r.2   123137859   lysine-specific demethylase JMJ706 
 tae-r.2   123050596   lysine-specific demethylase JMJ706 
 tae-r.2   123128069   lysine-specific demethylase JMJ706 
 hvu-r.1   123403456   lysine-specific demethylase JMJ706-like 
 hvu-r.1   123436567   lysine-specific demethylase JMJ706-like 
 sbi-r.1   8073883   lysine-specific demethylase JMJ706 
 sbi-r.1   8086289   lysine-specific demethylase JMJ706 
 bdi-r.1   100823075   lysine-specific demethylase JMJ706 
 cre-r.1   CHLRE_02g078700v5   uncharacterized protein 

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Top 50 coexpressed genes to 121223296 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121223296 (ghi-r.1 coexpression data)

CoexMap"121223296"


ghiLOC121223296 | Entrez gene ID : 121223296    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 1 1 2 1 2 1 1 2 3 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (356 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (5166 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (561 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0034647 [list] [network] histone H3K4me/H3K4me2/H3K4me3 demethylase activity  (29 genes)  IEA  
Protein XP_040960394.1 [sequence] [blastp]
XP_040960397.1 [sequence] [blastp]
XP_040960400.1 [sequence] [blastp]
XP_040960404.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_040960394.1)
nucl 9  (predict for XP_040960397.1)
nucl 7,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040960400.1)
nucl 7,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040960404.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_040960394.1)
chlo 4,  other 4  (predict for XP_040960397.1)
chlo 4,  other 4  (predict for XP_040960400.1)
chlo 4,  other 4  (predict for XP_040960404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121223296
ghi-r.1
for
107938573
ghi-r.1
for
107944818
ghi-r.1
for
107946671
ath-u.5
for
AT5G46910
bra-r.6
for
103839565
bra-r.6
for
103853751
bna-r.1
for
111202086
bna-r.1
for
106366838
bna-r.1
for
106381891
cit-r.1
for
102611554
gma-u.5
for
100798611
vvi-u.5
for
100266131
ppo-u.5
for
7456090
ppo-u.5
for
18094128
mtr-u.5
for
11433984
sly-u.5
for
101268889
sly-u.5
for
101251071
sot-r.1
for
102585838
nta-r.1
for
107760192
osa-u.5
for
4349499
osa-u.5
for
4330404
zma-u.5
for
103626296
zma-u.5
for
103637730
zma-u.5
for
100501391
tae-r.2
for
123137859
tae-r.2
for
123050596
tae-r.2
for
123128069
hvu-r.1
for
123403456
hvu-r.1
for
123436567
sbi-r.1
for
8073883
sbi-r.1
for
8086289
bdi-r.1
for
100823075
cre-r.1
for
CHLRE_02g078700v5


Ortholog ID: 2758
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC107938573 LOC107944818 LOC107946767 AT5G46910 LOC103839565 LOC103853751 LOC111202086 LOC106381891 LOC106400035 LOC102611554 LOC100798611 LOC100306287 LOC100266131 LOC7456090 LOC18094128 LOC11433984 LOC101268889 LOC101264047 LOC102585838 LOC107760192 LOC107808546 LOC4349499 LOC4330404 LOC103626296 LOC103637730 LOC100501391 LOC123137859 LOC123128069 LOC123126286 LOC123403456 LOC123436567 LOC8073883 LOC8086289 LOC100823075 CHLRE_02g078700v5
Function* lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706-like lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ706 JmjC domain-containing protein lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ13-like lysine-specific demethylase JMJ13-like lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ13 lysine-specific demethylase JMJ706-like lysine-specific demethylase JMJ706-like lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 uncharacterized LOC100501391 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706-like lysine-specific demethylase JMJ706-like lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 lysine-specific demethylase JMJ706 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
gma00062 Fatty acid elongation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00730 Thiamine metabolism 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00410 beta-Alanine metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00410 beta-Alanine metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04016 MAPK signaling pathway - plant 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
tae04075 Plant hormone signal transduction 3
tae00500 Starch and sucrose metabolism 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 3
sbi00500 Starch and sucrose metabolism 3
sbi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 2
bdi00790 Folate biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107938573 107944818 107946767 834736 103839565 103853751 111202086 106381891 106400035 102611554 100798611 100306287 100266131 7456090 18094128 11433984 101268889 101264047 102585838 107760192 107808546 4349499 4330404 103626296 103637730 100501391 123137859 123128069 123126286 123403456 123436567 8073883 8086289 100823075 5727257
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