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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121224196   chromatin structure-remodeling complex protein SYD 
 ghi-r.1   107945772   factor of DNA methylation 1 
 ghi-r.1   107944809   cleavage stimulation factor subunit 77-like 
 ghi-r.1   107940218   factor of DNA methylation 1 
 gma-u.5   102668228   protein INVOLVED IN DE NOVO 2 

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Top 50 coexpressed genes to 121224196 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121224196 (ghi-r.1 coexpression data)

CoexMap"121224196"


ghiLOC121224196 | Entrez gene ID : 121224196    
Species ghi gma vvi bdi bna ppo sbi cit hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010027 [list] [network] thylakoid membrane organization  (41 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (180 genes)  IEA  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008094 [list] [network] ATP-dependent activity, acting on DNA  (263 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_040962941.1 [sequence] [blastp]
XP_040962942.1 [sequence] [blastp]
XP_040962943.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_040962941.1)
chlo 8,  mito 1  (predict for XP_040962942.1)
chlo 3,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_040962943.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_040962941.1)
scret 2  (predict for XP_040962942.1)
other 8  (predict for XP_040962943.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121224196
ghi-r.1
for
107945772
ghi-r.1
for
107944809
ghi-r.1
for
107940218
gma-u.5
for
102668228


Ortholog ID: 13934
Species ghi ghi ghi gma
Symbol LOC121224196 LOC107945772 LOC107938824 LOC102668228
Function* chromatin structure-remodeling complex protein SYD factor of DNA methylation 1 flowering time control protein FY protein INVOLVED IN DE NOVO 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03015 mRNA surveillance pathway 2
ghi03440 Homologous recombination 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121224196 107945772 107938824 102668228
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