ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121224463	uncharacterized LOC121224463
ghi-r.1	107916521	uncharacterized LOC107916521
ghi-r.1	107940314	uncharacterized LOC107940314
ghi-r.1	121230271	uncharacterized LOC121230271
ath-u.5	AT4G33380	dimethylallyl, adenosine tRNA methylthiotransferase
bra-r.6	103834488	uncharacterized LOC103834488
bra-r.6	103847906	uncharacterized LOC103847906
bna-r.1	106361101	uncharacterized LOC106361101
bna-r.1	BNAC01G04830D	uncharacterized BNAC01G04830D
bna-r.1	106406100	uncharacterized LOC106406100
cit-r.1	102618221	uncharacterized LOC102618221
gma-u.5	100778720	uncharacterized LOC100778720
gma-u.5	100789577	uncharacterized LOC100789577
gma-u.5	100793928	uncharacterized LOC100793928
vvi-u.5	100248838	uncharacterized LOC100248838
ppo-u.5	18104915	uncharacterized LOC18104915
ppo-u.5	7472696	uncharacterized LOC7472696
mtr-u.5	11431374	uncharacterized LOC11431374
mtr-u.5	11422742	uncharacterized LOC11422742
sly-u.5	101258254	uncharacterized LOC101258254
sly-u.5	101263039	uncharacterized LOC101263039
sot-r.1	102604212	uncharacterized LOC102604212
nta-r.1	107822425	uncharacterized LOC107822425
nta-r.1	107773165	uncharacterized LOC107773165
nta-r.1	107764699	uncharacterized LOC107764699
osa-u.5	4340475	uncharacterized LOC4340475
osa-u.5	4330810	uncharacterized LOC4330810
zma-u.5	103655161	uncharacterized LOC103655161
zma-u.5	100217112	uncharacterized LOC100217112
zma-u.5	100191149	uncharacterized LOC100191149
tae-r.2	123138369	uncharacterized LOC123138369
tae-r.2	123128491	uncharacterized LOC123128491
tae-r.2	123145617	uncharacterized LOC123145617
hvu-r.1	123406256	uncharacterized LOC123406256
sbi-r.1	8078910	uncharacterized LOC8078910
sbi-r.1	8080022	uncharacterized LOC8080022
bdi-r.1	100838297	uncharacterized LOC100838297
bdi-r.1	104582213	uncharacterized LOC104582213
cre-r.1	CHLRE_03g165350v5	uncharacterized protein
cre-r.1	CHLRE_10g444750v5	uncharacterized protein

Top 50 coexpressed genes to 121224463 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121224463 (ghi-r.1 coexpression data)

CoexMap"121224463"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040963788.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, vacu 2, chlo 1, nucl 1, cyto 1, pero 1, cysk_nucl 1, nucl_plas 1, cyto_pero 1

(predict for XP_040963788.1)

Subcellular
localization
TargetP

other 7, mito 7

(predict for XP_040963788.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121224463	ghi-r.1 for 107916521	ghi-r.1 for 107940314	ghi-r.1 for 121230271	ath-u.5 for AT4G33380	bra-r.6 for 103834488	bra-r.6 for 103847906	bna-r.1 for 106361101	bna-r.1 for BNAC01G04830D	bna-r.1 for 106406100	cit-r.1 for 102618221	gma-u.5 for 100778720	gma-u.5 for 100789577	gma-u.5 for 100793928	vvi-u.5 for 100248838	ppo-u.5 for 18104915	ppo-u.5 for 7472696	mtr-u.5 for 11431374	mtr-u.5 for 11422742	sly-u.5 for 101258254	sly-u.5 for 101263039	sot-r.1 for 102604212	nta-r.1 for 107822425	nta-r.1 for 107773165	nta-r.1 for 107764699	osa-u.5 for 4340475	osa-u.5 for 4330810	zma-u.5 for 103655161	zma-u.5 for 100217112	zma-u.5 for 100191149	tae-r.2 for 123138369	tae-r.2 for 123128491	tae-r.2 for 123145617	hvu-r.1 for 123406256	sbi-r.1 for 8078910	sbi-r.1 for 8080022	bdi-r.1 for 100838297	bdi-r.1 for 104582213	cre-r.1 for CHLRE_03g165350v5	cre-r.1 for CHLRE_10g444750v5

Ortholog

Ortholog ID: 3833

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC121224463

uncharacterized LOC107940314

uncharacterized LOC121230271

dimethylallyl, adenosine tRNA methylthiotransferase

uncharacterized LOC103834488

uncharacterized LOC103847906

uncharacterized LOC106361101

uncharacterized LOC106406100

uncharacterized LOC106438522

uncharacterized LOC102618221

uncharacterized LOC100789577

uncharacterized LOC100793928

uncharacterized LOC100816724

uncharacterized LOC100248838

uncharacterized LOC18104915

uncharacterized LOC7472696

uncharacterized LOC11431374

uncharacterized LOC11422742

uncharacterized LOC101258254

uncharacterized LOC101263039

uncharacterized LOC102604212

uncharacterized LOC107822425

uncharacterized LOC107764699

uncharacterized LOC107808345

uncharacterized LOC4340475

uncharacterized LOC4330810

uncharacterized LOC100217112

uncharacterized LOC100191149

uncharacterized LOC123138369

uncharacterized LOC123128491

uncharacterized LOC123145617

uncharacterized LOC123406256

uncharacterized LOC8078910

uncharacterized LOC8080022

uncharacterized LOC100838297

uncharacterized LOC104582213

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	8
ghi04144	Endocytosis	5
ghi04145	Phagosome	5
ghi04148	Efferocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	9
ghi04382	Cornified envelope formation	8
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	8
ghi04382	Cornified envelope formation	8
ghi00561	Glycerolipid metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	5
ath00190	Oxidative phosphorylation	3
ath04517	IgSF CAM signaling	2
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma03010	Ribosome	2
gma00561	Glycerolipid metabolism	2
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma04142	Lysosome	2
gma04145	Phagosome	2
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo00270	Cysteine and methionine metabolism	2
ppo00670	One carbon pool by folate	2
ppo04075	Plant hormone signal transduction	2
ppo00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00541	Biosynthesis of various nucleotide sugars	3
sly00190	Oxidative phosphorylation	2
sly01250	Biosynthesis of nucleotide sugars	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta00730	Thiamine metabolism	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3
zma00010	Glycolysis / Gluconeogenesis	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04144	Endocytosis	3
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2
hvu00500	Starch and sucrose metabolism	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	8

Expression

Expression pattern

Entrez Gene ID^*

121224463

107940314

121230271

829475

103834488

103847906

106361101

106406100

106438522

102618221

100789577

100793928

100816724

100248838

18104915

7472696

11431374

11422742

101258254

101263039

102604212

107822425

107764699

107808345

4340475

4330810

100217112

100191149

123138369

123128491

123145617

123406256

8078910

8080022

100838297

104582213

5729037

5716104

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	2	3	1	3	1	2	2	2	1	3	2	3	3	1	2	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121224463 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121224463 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**