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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121224620   pyruvate kinase isozyme A, chloroplastic 
 ghi-r.1   107947398   pyruvate kinase isozyme A, chloroplastic 
 cit-r.1   102620014   pyruvate kinase isozyme A, chloroplastic-like 
 gma-u.5   100797214   pyruvate kinase isozyme A, chloroplastic 
 gma-u.5   100780644   pyruvate kinase isozyme A, chloroplastic 
 vvi-u.5   100244565   pyruvate kinase isozyme A, chloroplastic 
 ppo-u.5   7470762   pyruvate kinase isozyme A, chloroplastic 
 ppo-u.5   7469653   pyruvate kinase isozyme A, chloroplastic 
 mtr-u.5   25485305   pyruvate kinase isozyme A, chloroplastic 
 sly-u.5   101259587   pyruvate kinase isozyme A, chloroplastic 
 sot-r.1   102604947   pyruvate kinase isozyme A, chloroplastic-like 
 nta-r.1   107799668   pyruvate kinase isozyme A, chloroplastic 
 nta-r.1   107824278   pyruvate kinase isozyme A, chloroplastic 
 osa-u.5   4333694   plastidial pyruvate kinase 1, chloroplastic 
 zma-u.5   100272951   uncharacterized LOC100272951 
 tae-r.2   123095662   plastidial pyruvate kinase 1, chloroplastic 
 tae-r.2   123090631   plastidial pyruvate kinase 1, chloroplastic 
 tae-r.2   123087306   pyruvate kinase isozyme A, chloroplastic 
 hvu-r.1   123447040   pyruvate kinase isozyme A, chloroplastic-like 
 sbi-r.1   8056731   pyruvate kinase isozyme A, chloroplastic 
 bdi-r.1   100835468   pyruvate kinase isozyme A, chloroplastic 

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Top 50 coexpressed genes to 121224620 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121224620 (ghi-r.1 coexpression data)

CoexMap"121224620"


ghiLOC121224620 | Entrez gene ID : 121224620    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre ath bna
Paralog 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00010 [list] [network] Glycolysis / Gluconeogenesis (341 genes)
ghi00620 [list] [network] Pyruvate metabolism (290 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006096 [list] [network] glycolytic process  (143 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0004743 [list] [network] pyruvate kinase activity  (35 genes)  IEA  
GO:0030955 [list] [network] potassium ion binding  (35 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (292 genes)  IEA  
Protein XP_040964131.1 [sequence] [blastp]
XP_040964132.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 1,  mito 1,  E.R. 1,  cysk 1,  cysk_nucl 1  (predict for XP_040964131.1)
cyto 5,  chlo 3,  cyto_nucl 3  (predict for XP_040964132.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for XP_040964131.1)
other 5,  chlo 5  (predict for XP_040964132.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121224620
ghi-r.1
for
107947398
cit-r.1
for
102620014
gma-u.5
for
100797214
gma-u.5
for
100780644
vvi-u.5
for
100244565
ppo-u.5
for
7470762
ppo-u.5
for
7469653
mtr-u.5
for
25485305
sly-u.5
for
101259587
sot-r.1
for
102604947
nta-r.1
for
107799668
nta-r.1
for
107824278
osa-u.5
for
4333694
zma-u.5
for
100272951
tae-r.2
for
123095662
tae-r.2
for
123090631
tae-r.2
for
123087306
hvu-r.1
for
123447040
sbi-r.1
for
8056731
bdi-r.1
for
100835468


Ortholog ID: 12101
Species ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC121224620 LOC107947398 LOC102620014 LOC100797214 LOC100780644 LOC100244565 LOC7470762 LOC7469653 LOC25485305 LOC101259587 LOC102604947 LOC107799668 LOC107824278 LOC4333694 LOC100272951 LOC123095662 LOC123090631 LOC123087306 LOC123447040 LOC8056731 LOC100835468
Function* pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic-like pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic-like pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic plastidial pyruvate kinase 1, chloroplastic uncharacterized LOC100272951 plastidial pyruvate kinase 1, chloroplastic plastidial pyruvate kinase 1, chloroplastic pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic-like pyruvate kinase isozyme A, chloroplastic pyruvate kinase isozyme A, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 6
cit01200 Carbon metabolism 4
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
cit00592 alpha-Linolenic acid metabolism 3
cit00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 6
gma01230 Biosynthesis of amino acids 6
gma03010 Ribosome 6
gma00010 Glycolysis / Gluconeogenesis 5
gma00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 8
gma00010 Glycolysis / Gluconeogenesis 7
gma00620 Pyruvate metabolism 7
gma01230 Biosynthesis of amino acids 5
gma00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 6
vvi01212 Fatty acid metabolism 6
vvi01240 Biosynthesis of cofactors 5
vvi01200 Carbon metabolism 4
vvi00780 Biotin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 9
mtr01212 Fatty acid metabolism 9
mtr00620 Pyruvate metabolism 9
mtr01200 Carbon metabolism 9
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 4
sly00010 Glycolysis / Gluconeogenesis 2
sly00500 Starch and sucrose metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta00710 Carbon fixation by Calvin cycle 4
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta01200 Carbon metabolism 4
nta01230 Biosynthesis of amino acids 4
nta00100 Steroid biosynthesis 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 7
osa00620 Pyruvate metabolism 6
osa00010 Glycolysis / Gluconeogenesis 5
osa01212 Fatty acid metabolism 5
osa01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 9
zma00061 Fatty acid biosynthesis 8
zma01200 Carbon metabolism 7
zma01240 Biosynthesis of cofactors 7
zma00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae00620 Pyruvate metabolism 6
tae01200 Carbon metabolism 6
tae00020 Citrate cycle (TCA cycle) 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae00620 Pyruvate metabolism 5
tae01200 Carbon metabolism 5
tae03008 Ribosome biogenesis in eukaryotes 4
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae00620 Pyruvate metabolism 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
sbi01200 Carbon metabolism 5
sbi01230 Biosynthesis of amino acids 5
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121224620 107947398 102620014 100797214 100780644 100244565 7470762 7469653 25485305 101259587 102604947 107799668 107824278 4333694 100272951 123095662 123090631 123087306 123447040 8056731 100835468
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