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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121227912   ribulose bisphosphate carboxylase large chain-like 
 ghi-r.1   rpl23   50S ribosomal protein L23 
 ghi-r.1   rpl23   50S ribosomal protein L23 
 ath-u.5   rpl23   ribosomal protein L23 
 ath-u.5   rpl23   ribosomal protein L23 
 cit-r.1   rpl23   ribosomal protein L23 
 cit-r.1   rpl23   ribosomal protein L23 
 gma-u.5   rpl23   50S ribosomal protein L23 
 gma-u.5   rpl23   50S ribosomal protein L23 
 vvi-u.5   rpl23   50S ribosomal protein L23 
 vvi-u.5   rpl23   50S ribosomal protein L23 
 mtr-u.5   rpl23   ribosomal protein L23 
 sly-u.5   rpl23   ribosomal protein L23 
 sly-u.5   rpl23   ribosomal protein L23 
 sot-r.1   rpl23   ribosomal protein L23 
 sot-r.1   rpl23   ribosomal protein L23 
 nta-r.1   rpl23   50S ribosomal protein L23 
 nta-r.1   rpl23   50S ribosomal protein L23 
 osa-u.5   rpl23   ribosomal protein L23 
 osa-u.5   rpl23   ribosomal protein L23 
 sbi-r.1   rpl23   ribosomal protein L23 
 sbi-r.1   rpl23   ribosomal protein L23 
 sbi-r.1   rpl23   ribosomal protein L23 
 bdi-r.1   rpl23   ribosomal protein L23 
 bdi-r.1   rpl23   ribosomal protein L23 

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Top 50 coexpressed genes to 121227912 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121227912 (ghi-r.1 coexpression data)

CoexMap"121227912"


ghiLOC121227912 | Entrez gene ID : 121227912    
Species ghi ath cit gma vvi mtr sly sot nta osa sbi bdi tae bna ppo zma cre hvu bra
Paralog 3 2 2 2 2 1 2 2 2 2 3 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015977 [list] [network] carbon fixation  (19 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0016984 [list] [network] ribulose-bisphosphate carboxylase activity  (12 genes)  IEA  
GO:0019843 [list] [network] rRNA binding  (209 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (292 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_040966791.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1  (predict for XP_040966791.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040966791.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121227912
ghi-r.1
for
rpl23
ghi-r.1
for
rpl23
ath-u.5
for
rpl23
ath-u.5
for
rpl23
cit-r.1
for
rpl23
cit-r.1
for
rpl23
gma-u.5
for
rpl23
gma-u.5
for
rpl23
vvi-u.5
for
rpl23
vvi-u.5
for
rpl23
mtr-u.5
for
rpl23
sly-u.5
for
rpl23
sly-u.5
for
rpl23
sot-r.1
for
rpl23
sot-r.1
for
rpl23
nta-r.1
for
rpl23
nta-r.1
for
rpl23
osa-u.5
for
rpl23
osa-u.5
for
rpl23
sbi-r.1
for
rpl23
sbi-r.1
for
rpl23
sbi-r.1
for
rpl23
bdi-r.1
for
rpl23
bdi-r.1
for
rpl23


Ortholog ID: 5028
Species ghi ghi ghi ath ath cit cit gma gma vvi vvi mtr sly sly sot sot nta nta osa osa sbi sbi sbi bdi bdi
Symbol LOC121227912 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23 rpl23
Function* ribulose bisphosphate carboxylase large chain-like 50S ribosomal protein L23 50S ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 50S ribosomal protein L23 50S ribosomal protein L23 50S ribosomal protein L23 50S ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 50S ribosomal protein L23 50S ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23 ribosomal protein L23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi00195 Photosynthesis 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
ghi00710 Carbon fixation by Calvin cycle 3
ghi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath00190 Oxidative phosphorylation 5
ath00970 Aminoacyl-tRNA biosynthesis 4
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath00190 Oxidative phosphorylation 5
ath00970 Aminoacyl-tRNA biosynthesis 4
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 14
vvi00195 Photosynthesis 7
vvi03010 Ribosome 5
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 11
vvi03010 Ribosome 8
vvi00195 Photosynthesis 6
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121227912 3989224 3989168 844717 1466247 4271223 4271194 3989338 3989254 4025136 4025025 5333102 3950471 16976779 4099927 4099886 800478 800421 3131428 3131427 4549141 4549095 4549168 6439885 6439804
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