Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121228210   transcription factor bHLH162 
 ghi-r.1   107951333   transcription factor bHLH162 
 ghi-r.1   107887184   transcription factor bHLH162 
 ath-u.5   AT4G20970   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G10585   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103858529   transcription factor bHLH162 
 cit-r.1   112497032   transcription factor bHLH167-like 
 cit-r.1   102607218   transcription factor bHLH162-like 
 gma-u.5   100811485   transcription factor bHLH162 
 vvi-u.5   100853634   transcription factor bHLH167 
 ppo-u.5   7453762   transcription factor bHLH162 
 sly-u.5   101247399   transcription factor bHLH162 
 sly-u.5   101248286   transcription factor bHLH162-like 
 sot-r.1   102588456   uncharacterized LOC102588456 
 osa-u.5   4326163   transcription factor bHLH168 
 osa-u.5   4326162   transcription factor bHLH168 
 zma-u.5   100272488   uncharacterized LOC100272488 
 tae-r.2   123068153   transcription factor bHLH168 
 tae-r.2   123068154   transcription factor bHLH168 
 hvu-r.1   123449962   transcription factor bHLH168-like 

close


Top 50 coexpressed genes to 121228210 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 121228210 (ghi-r.1 coexpression data)

CoexMap"121228210"


ghiLOC121228210 | Entrez gene ID : 121228210    
Species ghi ath bra cit gma vvi ppo sly sot osa zma tae hvu cre sbi nta mtr bna bdi
Paralog 3 2 1 2 1 1 1 2 1 2 1 2 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription regulator complex  (240 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (678 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_040967446.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_040967446.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040967446.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121228210
ghi-r.1
for
107951333
ghi-r.1
for
107887184
ath-u.5
for
AT4G20970
ath-u.5
for
AT1G10585
bra-r.6
for
103858529
cit-r.1
for
112497032
cit-r.1
for
102607218
gma-u.5
for
100811485
vvi-u.5
for
100853634
ppo-u.5
for
7453762
sly-u.5
for
101247399
sly-u.5
for
101248286
sot-r.1
for
102588456
osa-u.5
for
4326163
osa-u.5
for
4326162
zma-u.5
for
100272488
tae-r.2
for
123068153
tae-r.2
for
123068154
hvu-r.1
for
123449962


Ortholog ID: 394
Species ghi ghi ath ath bra bna cit cit gma vvi ppo ppo sly sly sot osa osa zma tae tae hvu hvu sbi bdi
Symbol LOC107887184 LOC107898967 AT4G20970 AT1G10585 LOC103858529 LOC106373694 LOC102607218 LOC102624080 LOC100787505 LOC100243748 LOC7453762 LOC18104618 LOC101247399 LOC101248286 LOC102588456 LOC4326163 LOC4326162 LOC100272488 LOC123106062 LOC123106064 LOC123449962 LOC123442337 LOC8070469 LOC100832319
Function* transcription factor bHLH162 transcription factor bHLH162 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH162 transcription factor bHLH162-like transcription factor bHLH162-like transcription factor bHLH162 uncharacterized LOC100787505 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162-like uncharacterized LOC102588456 transcription factor bHLH168 transcription factor bHLH168 uncharacterized LOC100272488 transcription factor bHLH167 transcription factor bHLH167 transcription factor bHLH168-like transcription factor bHLH168-like transcription factor bHLH168 transcription factor bHLH168
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 4
ath00360 Phenylalanine metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 5
tae00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00010 Glycolysis / Gluconeogenesis 2
tae00053 Ascorbate and aldarate metabolism 2
tae00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
hvu00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107887184 107898967 827844 837600 103858529 106373694 102607218 102624080 100787505 100243748 7453762 18104618 101247399 101248286 102588456 4326163 4326162 100272488 123106062 123106064 123449962 123442337 8070469 100832319
The preparation time of this page was 0.2 [sec].