ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	121229230	thiamine phosphate phosphatase-like protein
ghi-r.1	107906114	inorganic pyrophosphatase 2
ghi-r.1	107906116	inorganic pyrophosphatase 1
ghi-r.1	107907151	thiamine phosphate phosphatase-like protein
ath-u.5	AT4G29530	Pyridoxal phosphate phosphatase-related protein
ath-u.5	PEPC1	Pyridoxal phosphate phosphatase-related protein
ath-u.5	PS2	inorganic pyrophosphatase 1
bra-r.6	103852818	inorganic pyrophosphatase 1
bra-r.6	103831791	inorganic pyrophosphatase 1
bra-r.6	103835945	inorganic pyrophosphatase 2
bna-r.1	106427114	inorganic pyrophosphatase 2
bna-r.1	106372039	thiamine phosphate phosphatase-like protein
bna-r.1	106351387	inorganic pyrophosphatase 2
cit-r.1	102621280	thiamine phosphate phosphatase-like protein
cit-r.1	102616528	inorganic pyrophosphatase 1-like
cit-r.1	102617018	inorganic pyrophosphatase 1
gma-u.5	100785897	inorganic pyrophosphatase 2
vvi-u.5	100259473	thiamine phosphate phosphatase-like protein
vvi-u.5	100242977	inorganic pyrophosphatase 2
vvi-u.5	100248102	inorganic pyrophosphatase 2
ppo-u.5	7476647	thiamine phosphate phosphatase-like protein
ppo-u.5	18096733	inorganic pyrophosphatase 2
ppo-u.5	7469093	inorganic pyrophosphatase 1
mtr-u.5	11430663	inorganic pyrophosphatase 1
mtr-u.5	11441709	inorganic pyrophosphatase 2
mtr-u.5	11431439	inorganic pyrophosphatase 2
sly-u.5	101246036	inorganic pyrophosphatase 1-like
sly-u.5	psi14C	inorganic pyrophosphatase 1-like
sly-u.5	psi14B	psi14B protein
sot-r.1	102595179	inorganic pyrophosphatase 1-like
sot-r.1	102584868	inorganic pyrophosphatase 1-like
sot-r.1	102585181	inorganic pyrophosphatase 1-like
nta-r.1	107808981	inorganic pyrophosphatase 2
nta-r.1	107801270	inorganic pyrophosphatase 1-like
nta-r.1	107764795	thiamine phosphate phosphatase-like protein
osa-u.5	4324704	inorganic pyrophosphatase 1
zma-u.5	100281893	uncharacterized LOC100281893
zma-u.5	100284789	uncharacterized LOC100284789
zma-u.5	103636051	thiamine phosphate phosphatase-like protein
tae-r.2	123062040	inorganic pyrophosphatase 1
tae-r.2	123061420	thiamine phosphate phosphatase-like protein
tae-r.2	123065663	inorganic pyrophosphatase 1
hvu-r.1	123443834	thiamine phosphate phosphatase-like protein
hvu-r.1	123444297	inorganic pyrophosphatase 1-like
sbi-r.1	8069806	inorganic pyrophosphatase 1
sbi-r.1	8082203	thiamine phosphate phosphatase-like protein
bdi-r.1	100838589	thiamine phosphate phosphatase-like protein
bdi-r.1	100828291	inorganic pyrophosphatase 1

Top 50 coexpressed genes to 121229230 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 121229230 (ghi-r.1 coexpression data)

CoexMap"121229230"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00750 [list] [network] Vitamin B6 metabolism (39 genes)

ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)

GO BP

GO CC

GO MF

GO:0016791 [list] [network] phosphatase activity

(812 genes)

IEA

Protein

XP_040968797.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cyto_E.R. 3, cysk 2, nucl 1

(predict for XP_040968797.1)

Subcellular
localization
TargetP

other 6

(predict for XP_040968797.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 121229230	ghi-r.1 for 107906114	ghi-r.1 for 107906116	ghi-r.1 for 107907151	ath-u.5 for AT4G29530	ath-u.5 for PEPC1	ath-u.5 for PS2	bra-r.6 for 103852818	bra-r.6 for 103831791	bra-r.6 for 103835945	bna-r.1 for 106427114	bna-r.1 for 106372039	bna-r.1 for 106351387	cit-r.1 for 102621280	cit-r.1 for 102616528	cit-r.1 for 102617018	gma-u.5 for 100785897	vvi-u.5 for 100259473	vvi-u.5 for 100242977	vvi-u.5 for 100248102	ppo-u.5 for 7476647	ppo-u.5 for 18096733	ppo-u.5 for 7469093	mtr-u.5 for 11430663	mtr-u.5 for 11441709	mtr-u.5 for 11431439	sly-u.5 for 101246036	sly-u.5 for psi14C	sly-u.5 for psi14B	sot-r.1 for 102595179	sot-r.1 for 102584868	sot-r.1 for 102585181	nta-r.1 for 107808981	nta-r.1 for 107801270	nta-r.1 for 107764795	osa-u.5 for 4324704	zma-u.5 for 100281893	zma-u.5 for 100284789	zma-u.5 for 103636051	tae-r.2 for 123062040	tae-r.2 for 123061420	tae-r.2 for 123065663	hvu-r.1 for 123443834	hvu-r.1 for 123444297	sbi-r.1 for 8069806	sbi-r.1 for 8082203	bdi-r.1 for 100838589	bdi-r.1 for 100828291

Ortholog

Ortholog ID: 885

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

PEPC1

PS2

psi14C

psi14B

Function^*

inorganic pyrophosphatase 2

inorganic pyrophosphatase 1

Pyridoxal phosphate phosphatase-related protein

inorganic pyrophosphatase 1

inorganic pyrophosphatase 2

inorganic pyrophosphatase 1

inorganic pyrophosphatase 2-like

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 1-like

inorganic pyrophosphatase 1

inorganic pyrophosphatase 1-like protein

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 2

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 2

inorganic pyrophosphatase 1

inorganic pyrophosphatase 2

inorganic pyrophosphatase 1

inorganic pyrophosphatase 1-like

psi14B protein

inorganic pyrophosphatase 1-like

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 1-like

inorganic pyrophosphatase 1

uncharacterized LOC100281893

uncharacterized LOC100284789

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 1

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 1-like

inorganic pyrophosphatase 1

thiamine phosphate phosphatase-like protein

inorganic pyrophosphatase 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	5
ghi01240	Biosynthesis of cofactors	5
ghi00230	Purine metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00750	Vitamin B6 metabolism	3
ghi01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00600	Sphingolipid metabolism	4
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3
ath04130	SNARE interactions in vesicular transport	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	3
ath00564	Glycerophospholipid metabolism	2
ath00750	Vitamin B6 metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	2
ath00750	Vitamin B6 metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	5
bra01240	Biosynthesis of cofactors	5
bra00564	Glycerophospholipid metabolism	2
bra00740	Riboflavin metabolism	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00564	Glycerophospholipid metabolism	2
bra00740	Riboflavin metabolism	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00740	Riboflavin metabolism	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	6
bna01240	Biosynthesis of cofactors	6
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	4
bna01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00750	Vitamin B6 metabolism	6
bna01240	Biosynthesis of cofactors	6
bna00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3
cit00740	Riboflavin metabolism	3
cit04142	Lysosome	3
cit00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00750	Vitamin B6 metabolism	3
gma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2
vvi00750	Vitamin B6 metabolism	2
vvi01240	Biosynthesis of cofactors	2
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	2
vvi00750	Vitamin B6 metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2
ppo00261	Monobactam biosynthesis	2
ppo00450	Selenocompound metabolism	2
ppo00920	Sulfur metabolism	2
ppo01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	3
ppo00561	Glycerolipid metabolism	3
ppo00566	Sulfoquinovose metabolism	3
ppo00740	Riboflavin metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	5
ppo00010	Glycolysis / Gluconeogenesis	4
ppo01230	Biosynthesis of amino acids	4
ppo00710	Carbon fixation by Calvin cycle	3
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00750	Vitamin B6 metabolism	6
mtr01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	7
mtr00750	Vitamin B6 metabolism	6
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00750	Vitamin B6 metabolism	6
mtr01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00750	Vitamin B6 metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00750	Vitamin B6 metabolism	4
sly01200	Carbon metabolism	2
sly00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00750	Vitamin B6 metabolism	4
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00564	Glycerophospholipid metabolism	3
sot00750	Vitamin B6 metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00750	Vitamin B6 metabolism	6
sot01240	Biosynthesis of cofactors	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00750	Vitamin B6 metabolism	5
sot01240	Biosynthesis of cofactors	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta01250	Biosynthesis of nucleotide sugars	4
nta04075	Plant hormone signal transduction	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	3
nta01250	Biosynthesis of nucleotide sugars	3
nta04075	Plant hormone signal transduction	2
nta00040	Pentose and glucuronate interconversions	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00750	Vitamin B6 metabolism	4
nta01240	Biosynthesis of cofactors	4
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2
osa00566	Sulfoquinovose metabolism	2
osa00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	4
zma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	9
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	3
sbi00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	4

Expression

Expression pattern

Entrez Gene ID^*

121229364

107896107

107897395

829074

838347

843632

103852818

103835945

103872553

106351387

111197984

106369031

102621280

102616528

102617018

100306469

100306472

100242977

100248102

100247400

7476647

18096733

7469093

25500417

25500420

25500421

101246036

101259946

543790

102584868

102593866

102594841

107764795

107795066

107770164

4324704

100281893

100284789

103636051

123062040

123065663

123070764

123443834

123444297

8069806

8082203

100838589

100828291

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	1	3	3	3	3	3	3	1	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 121229230 (ghi-r.1 coexpression data)

Top 50 enrichment test to 121229230 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**