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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121230285   ethylene-responsive transcription factor RAP2-1 
 ghi-r.1   107933239   ethylene-responsive transcription factor RAP2-10 
 ghi-r.1   107905589   ethylene-responsive transcription factor RAP2-1 
 ath-u.5   DEAR2   DREB and EAR motif protein 2 
 ath-u.5   RAP2.1   uncharacterized protein 
 ath-u.5   RAP2.10   uncharacterized protein 
 bra-r.6   103862527   ethylene-responsive transcription factor RAP2-10 
 bra-r.6   103833096   ethylene-responsive transcription factor RAP2-1 
 bna-r.1   125594131   ethylene-responsive transcription factor RAP2-10-like 
 bna-r.1   111200896   ethylene-responsive transcription factor ERF010-like 
 bna-r.1   106449304   ethylene-responsive transcription factor RAP2-10 
 cit-r.1   102623324   ethylene-responsive transcription factor ERF011 
 cit-r.1   102627433   ethylene-responsive transcription factor RAP2-1-like 
 gma-u.5   100784157   ethylene-responsive transcription factor ERF008 
 gma-u.5   100783682   ethylene-responsive transcription factor ERF011 
 gma-u.5   100789373   ethylene-responsive transcription factor ERF010 
 vvi-u.5   100233129   drought responsive element binding protein 
 vvi-u.5   100245542   ethylene-responsive transcription factor ERF011 
 ppo-u.5   18104860   ethylene-responsive transcription factor RAP2-1 
 ppo-u.5   7462867   ethylene-responsive transcription factor RAP2-1 
 ppo-u.5   7483100   ethylene-responsive transcription factor RAP2-10 
 mtr-u.5   11432890   ethylene-responsive transcription factor RAP2-1 
 mtr-u.5   11428031   ethylene-responsive transcription factor RAP2-1 
 mtr-u.5   11405445   ethylene-responsive transcription factor RAP2-9 
 sly-u.5   101248770   DEAR1-like TCP binding protein 
 sly-u.5   101268529   ethylene-responsive transcription factor ERF011 
 sot-r.1   102589042   ethylene-responsive transcription factor ERF010 
 sot-r.1   102581911   ethylene-responsive transcription factor RAP2-10-like 
 sot-r.1   102594399   ethylene-responsive transcription factor ERF011-like 
 nta-r.1   107797149   ethylene-responsive transcription factor ERF011-like 
 nta-r.1   107761973   ethylene-responsive transcription factor ERF011 
 nta-r.1   107777214   ethylene-responsive transcription factor ERF010-like 
 osa-u.5   4340244   ethylene-responsive transcription factor RAP2-9 
 zma-u.5   103638017   uncharacterized LOC103638017 
 tae-r.2   123162484   ethylene-responsive transcription factor RAP2-9 
 tae-r.2   123170149   ethylene-responsive transcription factor RAP2-9 
 tae-r.2   123150931   ethylene-responsive transcription factor RAP2-1 
 hvu-r.1   123408042   ethylene-responsive transcription factor RAP2-9-like 
 sbi-r.1   8076148   ethylene-responsive transcription factor RAP2-1 
 bdi-r.1   100845753   ethylene-responsive transcription factor RAP2-1 

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Top 50 coexpressed genes to 121230285 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121230285 (ghi-r.1 coexpression data)

CoexMap"121230285"


ghiLOC121230285 | Entrez gene ID : 121230285    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 3 2 3 2 3 3 2 3 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_040970766.1 [sequence] [blastp]
XP_040970767.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 2  (predict for XP_040970766.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_040970767.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_040970766.1)
other 5,  chlo 4  (predict for XP_040970767.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121230285
ghi-r.1
for
107933239
ghi-r.1
for
107905589
ath-u.5
for
DEAR2
ath-u.5
for
RAP2.1
ath-u.5
for
RAP2.10
bra-r.6
for
103862527
bra-r.6
for
103833096
bna-r.1
for
125594131
bna-r.1
for
111200896
bna-r.1
for
106449304
cit-r.1
for
102623324
cit-r.1
for
102627433
gma-u.5
for
100784157
gma-u.5
for
100783682
gma-u.5
for
100789373
vvi-u.5
for
100233129
vvi-u.5
for
100245542
ppo-u.5
for
18104860
ppo-u.5
for
7462867
ppo-u.5
for
7483100
mtr-u.5
for
11432890
mtr-u.5
for
11428031
mtr-u.5
for
11405445
sly-u.5
for
101248770
sly-u.5
for
101268529
sot-r.1
for
102589042
sot-r.1
for
102581911
sot-r.1
for
102594399
nta-r.1
for
107797149
nta-r.1
for
107761973
nta-r.1
for
107777214
osa-u.5
for
4340244
zma-u.5
for
103638017
tae-r.2
for
123162484
tae-r.2
for
123170149
tae-r.2
for
123150931
hvu-r.1
for
123408042
sbi-r.1
for
8076148
bdi-r.1
for
100845753


Ortholog ID: 1453
Species ghi ghi ath ath ath bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107905589 LOC107931675 RAP2.10 RAP2.9 CEJ1 LOC103833096 LOC103862049 LOC125594131 LOC106366783 LOC106391329 LOC102623324 LOC102627433 LOC100784157 LOC100783682 DREB1 LOC100233129 LOC100245542 LOC18104860 LOC7462867 LOC7489746 LOC11432890 LOC11428031 LOC11405445 LOC101248770 LOC101268529 LOC102589042 LOC102581911 LOC102594399 LOC107761973 LOC107780883 LOC107806811 LOC4340244 LOC103638017 LOC123162484 LOC123170149 LOC123150931 LOC123408042 LOC8076148 LOC100845753
Function* ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-10 uncharacterized protein uncharacterized protein cooperatively regulated by ethylene and jasmonate 1 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-10 ethylene-responsive transcription factor RAP2-10-like ethylene-responsive transcription factor ERF010 ethylene-responsive transcription factor ERF008-like ethylene-responsive transcription factor ERF011 ethylene-responsive transcription factor RAP2-1-like ethylene-responsive transcription factor ERF008 ethylene-responsive transcription factor ERF011 dehydration responsive element binding protein drought responsive element binding protein ethylene-responsive transcription factor ERF011 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor ERF010 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-9 DEAR1-like TCP binding protein ethylene-responsive transcription factor ERF011 ethylene-responsive transcription factor ERF010 ethylene-responsive transcription factor RAP2-10-like ethylene-responsive transcription factor ERF011-like ethylene-responsive transcription factor ERF011 ethylene-responsive transcription factor RAP2-1-like ethylene-responsive transcription factor ERF011-like ethylene-responsive transcription factor RAP2-9 uncharacterized LOC103638017 ethylene-responsive transcription factor RAP2-9 ethylene-responsive transcription factor RAP2-9 ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-9-like ethylene-responsive transcription factor RAP2-1 ethylene-responsive transcription factor RAP2-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00350 Tyrosine metabolism 3
bra00360 Phenylalanine metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 5
bna00650 Butanoate metabolism 5
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00350 Tyrosine metabolism 3
ppo00360 Phenylalanine metabolism 3
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00270 Cysteine and methionine metabolism 2
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 11
ppo04016 MAPK signaling pathway - plant 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 7
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107905589 107931675 829843 826148 824188 103833096 103862049 125594131 106366783 106391329 102623324 102627433 100784157 100783682 547642 100233129 100245542 18104860 7462867 7489746 11432890 11428031 11405445 101248770 101268529 102589042 102581911 102594399 107761973 107780883 107806811 4340244 103638017 123162484 123170149 123150931 123408042 8076148 100845753
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