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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121230344   thylakoid lumenal 29 kDa protein, chloroplastic 
 ghi-r.1   121218230   thylakoid lumenal 29 kDa protein, chloroplastic 
 ath-u.5   TL29   ascorbate peroxidase 4 
 bra-r.6   103858501   thylakoid lumenal 29 kDa protein, chloroplastic 
 bna-r.1   106435671   thylakoid lumenal 29 kDa protein, chloroplastic 
 bna-r.1   106438471   thylakoid lumenal 29 kDa protein, chloroplastic 
 cit-r.1   102618981   thylakoid lumenal 29 kDa protein, chloroplastic 
 gma-u.5   100799504   thylakoid lumenal 29 kDa protein, chloroplastic 
 gma-u.5   100795192   peroxidase-like protein 
 vvi-u.5   104882489   thylakoid lumenal 29 kDa protein, chloroplastic 
 ppo-u.5   7468886   thylakoid lumenal 29 kDa protein, chloroplastic 
 mtr-u.5   11437370   thylakoid lumenal 29 kDa protein, chloroplastic 
 sly-u.5   101263901   thylakoid lumenal 29 kDa protein, chloroplastic-like 
 sot-r.1   102585566   thylakoid lumenal 29 kDa protein, chloroplastic 
 nta-r.1   107795195   thylakoid lumenal 29 kDa protein, chloroplastic 
 nta-r.1   107821470   thylakoid lumenal 29 kDa protein, chloroplastic 
 osa-u.5   4336886   thylakoid lumenal 29 kDa protein, chloroplastic 
 zma-u.5   100272974   Thylakoid lumenal 29 kDa protein chloroplastic 
 tae-r.2   123190287   thylakoid lumenal 29 kDa protein, chloroplastic 
 tae-r.2   123054409   thylakoid lumenal 29 kDa protein, chloroplastic 
 tae-r.2   123046551   thylakoid lumenal 29 kDa protein, chloroplastic 
 hvu-r.1   123427722   thylakoid lumenal 29 kDa protein, chloroplastic 
 sbi-r.1   110436335   thylakoid lumenal 29 kDa protein, chloroplastic 
 bdi-r.1   100831503   thylakoid lumenal 29 kDa protein, chloroplastic 
 cre-r.1   CHLRE_05g233900v5   uncharacterized protein 

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Top 50 coexpressed genes to 121230344 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121230344 (ghi-r.1 coexpression data)

CoexMap"121230344"


ghiLOC121230344 | Entrez gene ID : 121230344    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034599 [list] [network] cellular response to oxidative stress  (77 genes)  IEA  
GO:0000302 [list] [network] response to reactive oxygen species  (102 genes)  IEA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (228 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (283 genes)  IEA  
GO MF
GO:0004601 [list] [network] peroxidase activity  (287 genes)  IEA  
GO:0020037 [list] [network] heme binding  (1011 genes)  IEA  
Protein XP_040970869.1 [sequence] [blastp]
XP_040970870.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_040970869.1)
chlo 9  (predict for XP_040970870.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_040970869.1)
chlo 5  (predict for XP_040970870.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121230344
ghi-r.1
for
121218230
ath-u.5
for
TL29
bra-r.6
for
103858501
bna-r.1
for
106435671
bna-r.1
for
106438471
cit-r.1
for
102618981
gma-u.5
for
100799504
gma-u.5
for
100795192
vvi-u.5
for
104882489
ppo-u.5
for
7468886
mtr-u.5
for
11437370
sly-u.5
for
101263901
sot-r.1
for
102585566
nta-r.1
for
107795195
nta-r.1
for
107821470
osa-u.5
for
4336886
zma-u.5
for
100272974
tae-r.2
for
123190287
tae-r.2
for
123054409
tae-r.2
for
123046551
hvu-r.1
for
123427722
sbi-r.1
for
110436335
bdi-r.1
for
100831503
cre-r.1
for
CHLRE_05g233900v5


Ortholog ID: 10171
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC121230344 LOC121218230 TL29 LOC103858501 LOC106435671 LOC106438471 LOC102618981 LOC100799504 LOC100795192 LOC104882489 LOC7468886 LOC11437370 LOC101263901 LOC102585566 LOC107795195 LOC107821470 LOC4336886 LOC100272974 LOC123190287 LOC123054409 LOC123046551 LOC123427722 LOC110436335 LOC100831503 CHLRE_05g233900v5
Function* thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic ascorbate peroxidase 4 thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic peroxidase-like protein thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic-like thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic Thylakoid lumenal 29 kDa protein chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic thylakoid lumenal 29 kDa protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 9
ghi00190 Oxidative phosphorylation 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 5
ghi00190 Oxidative phosphorylation 2
ghi00480 Glutathione metabolism 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 8
bra00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01200 Carbon metabolism 3
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 9
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00196 Photosynthesis - antenna proteins 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot00630 Glyoxylate and dicarboxylate metabolism 5
sot00195 Photosynthesis 5
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 3
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 6
tae00860 Porphyrin metabolism 3
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 4
hvu03010 Ribosome 3
hvu00196 Photosynthesis - antenna proteins 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
sbi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cre01240 Biosynthesis of cofactors 3
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121230344 121218230 826480 103858501 106435671 106438471 102618981 100799504 100795192 104882489 7468886 11437370 101263901 102585566 107795195 107821470 4336886 100272974 123190287 123054409 123046551 123427722 110436335 100831503 5727749
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